Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:48409346-48769348

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm5485 16 48399453 to 48412416 12963 - lncRNA gene predicted gene 5485
Tssr141303 16 48410120 to 48410150 30 - TSS region transcription start site region 141303
n-R5s36 16 48410306 to 48410424 118 - rRNA gene nuclear encoded rRNA 5S 36
Tssr141304 16 48412408 to 48412421 13 - TSS region transcription start site region 141304
Cpgi8303 16 48431118 to 48431390 272 CpG island CpG island 8303
Morc1 16 48431237 to 48630900 199663 + protein coding gene microrchidia 1
Tssr138654 16 48431281 to 48431323 42 + TSS region transcription start site region 138654
Tssr138655 16 48431330 to 48431339 9 + TSS region transcription start site region 138655
Tssr138656 16 48479560 to 48479577 17 + TSS region transcription start site region 138656
Tssr141305 16 48589346 to 48589348 2 - TSS region transcription start site region 141305
Tssr138657 16 48594605 to 48594620 15 + TSS region transcription start site region 138657
Tssr138658 16 48594627 to 48594680 53 + TSS region transcription start site region 138658
Tssr138659 16 48598883 to 48598886 3 + TSS region transcription start site region 138659
Gm41458 16 48600118 to 48614343 14225 - lncRNA gene predicted gene, 41458
Tssr138660 16 48611656 to 48611671 15 + TSS region transcription start site region 138660
Tssr138661 16 48611685 to 48611720 35 + TSS region transcription start site region 138661
Tssr138662 16 48611725 to 48611741 16 + TSS region transcription start site region 138662
Tssr138663 16 48611782 to 48611785 3 + TSS region transcription start site region 138663
Tssr138664 16 48611788 to 48611808 20 + TSS region transcription start site region 138664
Tssr138665 16 48611809 to 48611820 11 + TSS region transcription start site region 138665
Tssr138666 16 48611844 to 48611853 9 + TSS region transcription start site region 138666
Tssr138667 16 48612160 to 48612206 46 + TSS region transcription start site region 138667
Tssr141306 16 48613838 to 48613865 27 - TSS region transcription start site region 141306
Tssr138668 16 48629918 to 48629922 4 + TSS region transcription start site region 138668
Tssr138669 16 48629988 to 48630011 23 + TSS region transcription start site region 138669
Tssr138670 16 48630154 to 48630166 12 + TSS region transcription start site region 138670
D16Mit62 16 48684711 to 48684860 149 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 62
D16Mit170 16 48684719 to 48684843 124 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 170
Trat1 16 48730774 to 48772021 41247 - protein coding gene T cell receptor associated transmembrane adaptor 1
Gm8670 16 48749400 to 48750448 1048 - pseudogene predicted gene 8670
Cpgi8304 16 48750186 to 48750506 320 CpG island CpG island 8304