Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:4705187-4875203

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dnaja3 16 4684070 to 4707695 23625 + protein coding gene DnaJ heat shock protein family (Hsp40) member A3
Tssr136868 16 4707125 to 4707130 5 + TSS region transcription start site region 136868
Nmral1 16 4711317 to 4719356 8039 - protein coding gene NmrA-like family domain containing 1
Tssr139788 16 4719043 to 4719054 11 - TSS region transcription start site region 139788
Tssr139789 16 4719078 to 4719126 48 - TSS region transcription start site region 139789
Tssr139790 16 4719128 to 4719146 18 - TSS region transcription start site region 139790
Tssr139791 16 4719148 to 4719164 16 - TSS region transcription start site region 139791
Cpgi7919 16 4726099 to 4727282 1183 CpG island CpG island 7919
Tssr136869 16 4726284 to 4726290 6 + TSS region transcription start site region 136869
Tssr136870 16 4726357 to 4726370 13 + TSS region transcription start site region 136870
Hmox2 16 4726361 to 4766741 40380 + protein coding gene heme oxygenase 2
Tssr136871 16 4726374 to 4726439 65 + TSS region transcription start site region 136871
Gm15859 16 4729869 to 4730809 940 + antisense lncRNA gene predicted gene 15859
Tssr136872 16 4731215 to 4731217 2 + TSS region transcription start site region 136872
Tssr136873 16 4734972 to 4734976 4 + TSS region transcription start site region 136873
Tssr136874 16 4738722 to 4738723 1 + TSS region transcription start site region 136874
Tssr136875 16 4741543 to 4741592 49 + TSS region transcription start site region 136875
Tssr136876 16 4741594 to 4741630 36 + TSS region transcription start site region 136876
Tssr136877 16 4756879 to 4756881 2 + TSS region transcription start site region 136877
Cpgi7920 16 4756915 to 4757115 200 CpG island CpG island 7920
Tssr136878 16 4762616 to 4762631 15 + TSS region transcription start site region 136878
Cdip1 16 4765461 to 4790287 24826 - protein coding gene cell death inducing Trp53 target 1
Tssr139792 16 4769673 to 4769691 18 - TSS region transcription start site region 139792
Tssr139793 16 4769723 to 4769742 19 - TSS region transcription start site region 139793
Gm15835 16 4777743 to 4779454 1711 + lincRNA gene predicted gene 15835
Cpgi7921 16 4789315 to 4790510 1195 CpG island CpG island 7921
Tssr139794 16 4789865 to 4789885 20 - TSS region transcription start site region 139794
Tssr139795 16 4789887 to 4789949 62 - TSS region transcription start site region 139795
Tssr139796 16 4789984 to 4789995 11 - TSS region transcription start site region 139796
Tssr139797 16 4790000 to 4790009 9 - TSS region transcription start site region 139797
Tssr139798 16 4790187 to 4790203 16 - TSS region transcription start site region 139798
Tssr139799 16 4790205 to 4790216 11 - TSS region transcription start site region 139799
Tssr139800 16 4790220 to 4790300 80 - TSS region transcription start site region 139800
Tssr139801 16 4829283 to 4829319 36 - TSS region transcription start site region 139801
Tssr136879 16 4835406 to 4835422 16 + TSS region transcription start site region 136879
4930562C15Rik 16 4835416 to 4867686 32270 + protein coding gene RIKEN cDNA 4930562C15 gene
Tssr136880 16 4835432 to 4835457 25 + TSS region transcription start site region 136880
Gm10914 16 4869216 to 4870624 1408 - unclassified gene predicted gene 10914
Tssr139802 16 4870690 to 4870697 7 - TSS region transcription start site region 139802
Ubald1 16 4874779 to 4879851 5072 - protein coding gene UBA-like domain containing 1