Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:46335348-47645355

Filter by:
25 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nectin3 16 46387706 to 46498525 110819 - protein coding gene nectin cell adhesion molecule 3
Tssr141291 16 46433694 to 46433704 10 - TSS region transcription start site region 141291
Tssr141292 16 46481340 to 46481344 4 - TSS region transcription start site region 141292
Cpgi8302 16 46496025 to 46498212 2187 CpG island CpG island 8302
Tssr141293 16 46496285 to 46496311 26 - TSS region transcription start site region 141293
Tssr141294 16 46496324 to 46496338 14 - TSS region transcription start site region 141294
Tssr141295 16 46496869 to 46496883 14 - TSS region transcription start site region 141295
Tssr141296 16 46496943 to 46496954 11 - TSS region transcription start site region 141296
Tssr141297 16 46496955 to 46496986 31 - TSS region transcription start site region 141297
Tssr141298 16 46496987 to 46497010 23 - TSS region transcription start site region 141298
Tssr141299 16 46498530 to 46498542 12 - TSS region transcription start site region 141299
Tssr141300 16 46498557 to 46498571 14 - TSS region transcription start site region 141300
Tssr141301 16 46498582 to 46498588 6 - TSS region transcription start site region 141301
Gm17900 16 46538043 to 46539032 989 + pseudogene predicted gene, 17900
D16Mit44 16 46799787 to 46799919 132 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 44
Gm35687 16 46926061 to 46926547 486 - pseudogene predicted gene, 35687
Tssr138644 16 46958876 to 46958881 5 + TSS region transcription start site region 138644
Tssr141302 16 46990348 to 46990355 7 - TSS region transcription start site region 141302
Gm6912 16 47074203 to 47076034 1831 + pseudogene predicted gene 6912
Tssr138645 16 47212336 to 47212359 23 + TSS region transcription start site region 138645
Gm18169 16 47212370 to 47212895 525 + pseudogene predicted gene, 18169
n-TKctt2 16 47250546 to 47250618 72 + tRNA gene nuclear encoded tRNA lysine 2 (anticodon CTT)
Gm24651 16 47506319 to 47506425 106 - snRNA gene predicted gene, 24651
Gm25318 16 47595773 to 47596086 313 - unclassified non-coding RNA gene predicted gene, 25318
Gm6914 16 47620504 to 47621691 1187 + pseudogene predicted gene 6914