Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:46295348-47685355

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nectin3 16 46387706 to 46498525 110819 - protein coding gene nectin cell adhesion molecule 3
Tssr141291 16 46433694 to 46433704 10 - TSS region transcription start site region 141291
Tssr141292 16 46481340 to 46481344 4 - TSS region transcription start site region 141292
Cpgi8302 16 46496025 to 46498212 2187 CpG island CpG island 8302
Tssr141293 16 46496285 to 46496311 26 - TSS region transcription start site region 141293
Tssr141294 16 46496324 to 46496338 14 - TSS region transcription start site region 141294
Tssr141295 16 46496869 to 46496883 14 - TSS region transcription start site region 141295
Tssr141296 16 46496943 to 46496954 11 - TSS region transcription start site region 141296
Tssr141297 16 46496955 to 46496986 31 - TSS region transcription start site region 141297
Tssr141298 16 46496987 to 46497010 23 - TSS region transcription start site region 141298
Tssr141299 16 46498530 to 46498542 12 - TSS region transcription start site region 141299
Tssr141300 16 46498557 to 46498571 14 - TSS region transcription start site region 141300
Tssr141301 16 46498582 to 46498588 6 - TSS region transcription start site region 141301
Gm17900 16 46538043 to 46539032 989 + pseudogene predicted gene, 17900
D16Mit44 16 46799787 to 46799919 132 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 44
Gm35687 16 46926061 to 46926547 486 - pseudogene predicted gene, 35687
Tssr138644 16 46958876 to 46958881 5 + TSS region transcription start site region 138644
Tssr141302 16 46990348 to 46990355 7 - TSS region transcription start site region 141302
Gm6912 16 47074203 to 47076034 1831 + pseudogene predicted gene 6912
Tssr138645 16 47212336 to 47212359 23 + TSS region transcription start site region 138645
Gm18169 16 47212370 to 47212895 525 + pseudogene predicted gene, 18169
n-TKctt2 16 47250546 to 47250618 72 + tRNA gene nuclear encoded tRNA lysine 2 (anticodon CTT)
Gm24651 16 47506319 to 47506425 106 - snRNA gene predicted gene, 24651
Gm25318 16 47595773 to 47596086 313 - unclassified non-coding RNA gene predicted gene, 25318
Gm6914 16 47620504 to 47621691 1187 + pseudogene predicted gene 6914
D16Ium44 16 47651103 to 47651236 133 DNA segment DNA segment, Chr 16, Indiana University Medical 44
D16Ium43 16 47651137 to 47651286 149 DNA segment DNA segment, Chr 16, Indiana University Medical 43
D16Ium73 16 47653609 to 47653749 140 DNA segment DNA segment, Chr 16, Indiana University Medical 73