Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:46019836-46419967

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
4930546O09Rik 16 46021951 to 46027374 5423 unclassified non-coding RNA gene RIKEN cDNA 4930546O09 gene
Gm31198 16 46022196 to 46024423 2227 + lncRNA gene predicted gene, 31198
Cd96 16 46035657 to 46120251 84594 - protein coding gene CD96 antigen
Tssr141280 16 46038576 to 46038581 5 - TSS region transcription start site region 141280
Tssr141281 16 46038602 to 46038623 21 - TSS region transcription start site region 141281
Tssr141282 16 46039368 to 46039385 17 - TSS region transcription start site region 141282
Tssr138642 16 46039497 to 46039519 22 + TSS region transcription start site region 138642
Tssr141283 16 46049239 to 46049263 24 - TSS region transcription start site region 141283
Cpgi8301 16 46103968 to 46104159 191 CpG island CpG island 8301
Tssr138643 16 46113150 to 46113152 2 + TSS region transcription start site region 138643
Tssr141284 16 46120119 to 46120137 18 - TSS region transcription start site region 141284
Tssr141285 16 46120138 to 46120181 43 - TSS region transcription start site region 141285
Tssr141286 16 46120185 to 46120190 5 - TSS region transcription start site region 141286
Tssr141287 16 46120191 to 46120211 20 - TSS region transcription start site region 141287
Tssr141288 16 46120238 to 46120254 16 - TSS region transcription start site region 141288
Tssr4888 16 46120258 to 46120261 3 - TSS region transcription start site region 4888
Tssr141289 16 46120426 to 46120437 11 - TSS region transcription start site region 141289
Gm4737 16 46152985 to 46155077 2092 - protein coding gene predicted gene 4737
1700020B03Rik 16 46183151 to 46183603 452 unclassified gene RIKEN cDNA 1700020B03 gene
Tssr141290 16 46183588 to 46183621 33 - TSS region transcription start site region 141290
Gm26297 16 46219836 to 46219967 131 + snoRNA gene predicted gene, 26297
Nectin3 16 46387706 to 46498525 110819 - protein coding gene nectin cell adhesion molecule 3