Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:45974497-46104519

Filter by:
26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Plcxd2 16 45959263 to 46010218 50955 - protein coding gene phosphatidylinositol-specific phospholipase C, X domain containing 2
A130072N09Rik 16 45983919 to 45986492 2573 unclassified gene RIKEN cDNA A130072N09 gene
Tssr141272 16 45986445 to 45986474 29 - TSS region transcription start site region 141272
Tssr141273 16 45991358 to 45991359 1 - TSS region transcription start site region 141273
Tssr141274 16 46001807 to 46001818 11 - TSS region transcription start site region 141274
Tssr138637 16 46002034 to 46002042 8 + TSS region transcription start site region 138637
Tssr138638 16 46006511 to 46006553 42 + TSS region transcription start site region 138638
Tssr141275 16 46008899 to 46008903 4 - TSS region transcription start site region 141275
Tssr138639 16 46009094 to 46009105 11 + TSS region transcription start site region 138639
Cpgi8300 16 46010185 to 46010753 568 CpG island CpG island 8300
Tssr141276 16 46010212 to 46010223 11 - TSS region transcription start site region 141276
Tssr141277 16 46010229 to 46010251 22 - TSS region transcription start site region 141277
Tssr141278 16 46010262 to 46010284 22 - TSS region transcription start site region 141278
Tssr141279 16 46010355 to 46010437 82 - TSS region transcription start site region 141279
Tssr138640 16 46010553 to 46010580 27 + TSS region transcription start site region 138640
Tssr138641 16 46010773 to 46010776 3 + TSS region transcription start site region 138641
Gm24754 16 46018067 to 46018173 106 - snRNA gene predicted gene, 24754
4930546O09Rik 16 46021951 to 46027374 5423 unclassified non-coding RNA gene RIKEN cDNA 4930546O09 gene
Gm31198 16 46022196 to 46024423 2227 + lncRNA gene predicted gene, 31198
Cd96 16 46035657 to 46120251 84594 - protein coding gene CD96 antigen
Tssr141280 16 46038576 to 46038581 5 - TSS region transcription start site region 141280
Tssr141281 16 46038602 to 46038623 21 - TSS region transcription start site region 141281
Tssr141282 16 46039368 to 46039385 17 - TSS region transcription start site region 141282
Tssr138642 16 46039497 to 46039519 22 + TSS region transcription start site region 138642
Tssr141283 16 46049239 to 46049263 24 - TSS region transcription start site region 141283
Cpgi8301 16 46103968 to 46104159 191 CpG island CpG island 8301