Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:45777487-45997530

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Phldb2 16 45746243 to 45953598 207355 - protein coding gene pleckstrin homology like domain, family B, member 2
Tssr141256 16 45784491 to 45784504 13 - TSS region transcription start site region 141256
Tssr138634 16 45786979 to 45786988 9 + TSS region transcription start site region 138634
D130060J10Rik 16 45792569 to 45796052 3483 unclassified gene RIKEN cDNA D130060J10 gene
Tssr141257 16 45795384 to 45795389 5 - TSS region transcription start site region 141257
Tssr141258 16 45799769 to 45799773 4 - TSS region transcription start site region 141258
Tssr141259 16 45801780 to 45801790 10 - TSS region transcription start site region 141259
Tssr141260 16 45843477 to 45843481 4 - TSS region transcription start site region 141260
Cpgi8299 16 45844073 to 45844790 717 CpG island CpG island 8299
Tssr141261 16 45844228 to 45844236 8 - TSS region transcription start site region 141261
Tssr141262 16 45844303 to 45844381 78 - TSS region transcription start site region 141262
Tssr141263 16 45844970 to 45844987 17 - TSS region transcription start site region 141263
Tssr141264 16 45844997 to 45845015 18 - TSS region transcription start site region 141264
Tssr141265 16 45880712 to 45880713 1 - TSS region transcription start site region 141265
Tssr141266 16 45887487 to 45887530 43 - TSS region transcription start site region 141266
Tssr141267 16 45910461 to 45910503 42 - TSS region transcription start site region 141267
Tssr141268 16 45926408 to 45926411 3 - TSS region transcription start site region 141268
Tssr138635 16 45936307 to 45936317 10 + TSS region transcription start site region 138635
Gm15640 16 45936323 to 45939279 2956 + antisense lncRNA gene predicted gene 15640
Tssr141269 16 45937477 to 45937488 11 - TSS region transcription start site region 141269
Gm15638 16 45945565 to 45957495 11930 + antisense lncRNA gene predicted gene 15638
Tssr138636 16 45945584 to 45945641 57 + TSS region transcription start site region 138636
Tssr141270 16 45953497 to 45953562 65 - TSS region transcription start site region 141270
Tssr141271 16 45953565 to 45953603 38 - TSS region transcription start site region 141271
Plcxd2 16 45959263 to 46010218 50955 - protein coding gene phosphatidylinositol-specific phospholipase C, X domain containing 2
Lmr12c 16 45972450 to 45972589 139 QTL leishmaniasis resistance 12c
Lmr12b 16 45972450 to 45972589 139 QTL leishmaniasis resistance 12b
Lmr12a 16 45972450 to 45972589 139 QTL leishmaniasis resistance 12a
Lmr12 16 45972450 to 45972589 139 QTL leishmaniasis resistance 12
D16Mit126 16 45972450 to 45972589 139 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 126
A130072N09Rik 16 45983919 to 45986492 2573 unclassified gene RIKEN cDNA A130072N09 gene
Tssr141272 16 45986445 to 45986474 29 - TSS region transcription start site region 141272
Tssr141273 16 45991358 to 45991359 1 - TSS region transcription start site region 141273