Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:4561884-4744720

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi7913 16 4586498 to 4587098 600 CpG island CpG island 7913
D330022H12Rik 16 4592252 to 4594481 2229 - lncRNA gene RIKEN cDNA D330022H12 gene
Cpgi7914 16 4593804 to 4595667 1863 CpG island CpG island 7914
Tssr136858 16 4594683 to 4594735 52 + TSS region transcription start site region 136858
Glis2 16 4594713 to 4624924 30211 + protein coding gene GLIS family zinc finger 2
Tssr136859 16 4594740 to 4594759 19 + TSS region transcription start site region 136859
Tssr136860 16 4594853 to 4594884 31 + TSS region transcription start site region 136860
Pam16 16 4616464 to 4624988 8524 - protein coding gene presequence translocase-asssociated motor 16 homolog (S. cerevisiae)
Cpgi7915 16 4624297 to 4625115 818 CpG island CpG island 7915
Tssr139781 16 4624938 to 4624972 34 - TSS region transcription start site region 139781
Tssr139782 16 4624984 to 4624991 7 - TSS region transcription start site region 139782
Coro7 16 4626884 to 4679720 52836 - protein coding gene coronin 7
D16Mit180 16 4631112 to 4631218 106 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 180
Tssr139783 16 4634376 to 4634426 50 - TSS region transcription start site region 139783
Tssr139784 16 4635413 to 4635453 40 - TSS region transcription start site region 139784
Tssr136861 16 4639937 to 4639944 7 + TSS region transcription start site region 136861
Vasn 16 4639941 to 4650802 10861 + protein coding gene vasorin
Tssr136862 16 4639956 to 4639978 22 + TSS region transcription start site region 136862
Cpgi7916 16 4640032 to 4640442 410 CpG island CpG island 7916
Tssr136863 16 4649166 to 4649180 14 + TSS region transcription start site region 136863
Tssr139785 16 4670531 to 4670581 50 - TSS region transcription start site region 139785
Cpgi7917 16 4679146 to 4679957 811 CpG island CpG island 7917
Tssr139786 16 4679660 to 4679699 39 - TSS region transcription start site region 139786
Tssr139787 16 4679703 to 4679747 44 - TSS region transcription start site region 139787
Tssr136864 16 4679826 to 4679834 8 + TSS region transcription start site region 136864
Cpgi7918 16 4683689 to 4684603 914 CpG island CpG island 7918
Dnaja3 16 4684070 to 4707695 23625 + protein coding gene DnaJ heat shock protein family (Hsp40) member A3
Tssr136865 16 4684099 to 4684137 38 + TSS region transcription start site region 136865
Tssr136866 16 4684229 to 4684236 7 + TSS region transcription start site region 136866
Tssr136867 16 4701182 to 4701195 13 + TSS region transcription start site region 136867
Tssr136868 16 4707125 to 4707130 5 + TSS region transcription start site region 136868
Nmral1 16 4711317 to 4719356 8039 - protein coding gene NmrA-like family domain containing 1
Tssr139788 16 4719043 to 4719054 11 - TSS region transcription start site region 139788
Tssr139789 16 4719078 to 4719126 48 - TSS region transcription start site region 139789
Tssr139790 16 4719128 to 4719146 18 - TSS region transcription start site region 139790
Tssr139791 16 4719148 to 4719164 16 - TSS region transcription start site region 139791
Cpgi7919 16 4726099 to 4727282 1183 CpG island CpG island 7919
Tssr136869 16 4726284 to 4726290 6 + TSS region transcription start site region 136869
Tssr136870 16 4726357 to 4726370 13 + TSS region transcription start site region 136870
Hmox2 16 4726361 to 4766741 40380 + protein coding gene heme oxygenase 2
Tssr136871 16 4726374 to 4726439 65 + TSS region transcription start site region 136871
Gm15859 16 4729869 to 4730809 940 + antisense lncRNA gene predicted gene 15859
Tssr136872 16 4731215 to 4731217 2 + TSS region transcription start site region 136872
Tssr136873 16 4734972 to 4734976 4 + TSS region transcription start site region 136873
Tssr136874 16 4738722 to 4738723 1 + TSS region transcription start site region 136874
Tssr136875 16 4741543 to 4741592 49 + TSS region transcription start site region 136875
Tssr136876 16 4741594 to 4741630 36 + TSS region transcription start site region 136876