Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:45406982-45657042

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cd200 16 45382135 to 45409053 26918 - protein coding gene CD200 antigen
Cpgi8295 16 45408544 to 45408963 419 CpG island CpG island 8295
Tssr141234 16 45408932 to 45408950 18 - TSS region transcription start site region 141234
Tssr141235 16 45408955 to 45409048 93 - TSS region transcription start site region 141235
Tssr138625 16 45411520 to 45411526 6 + TSS region transcription start site region 138625
Gm5406 16 45411580 to 45412345 765 + pseudogene predicted gene 5406
Gm609 16 45412005 to 45493004 80999 - protein coding gene predicted gene 609
Gm16011 16 45426845 to 45429506 2661 - pseudogene predicted gene 16011
Tssr138626 16 45434853 to 45434854 1 + TSS region transcription start site region 138626
Tssr141236 16 45454914 to 45454926 12 - TSS region transcription start site region 141236
Tssr141237 16 45454932 to 45454974 42 - TSS region transcription start site region 141237
Tssr141238 16 45492931 to 45492948 17 - TSS region transcription start site region 141238
Tssr141239 16 45492962 to 45492993 31 - TSS region transcription start site region 141239
Gm17783 16 45511791 to 45532050 20259 - protein coding gene predicted gene, 17783
Tssr141240 16 45531982 to 45532042 60 - TSS region transcription start site region 141240
Gm6903 16 45533124 to 45534489 1365 - pseudogene predicted gene 6903
Tssr138627 16 45535292 to 45535301 9 + TSS region transcription start site region 138627
Tssr138628 16 45535303 to 45535317 14 + TSS region transcription start site region 138628
Slc9c1 16 45535309 to 45607001 71692 + protein coding gene solute carrier family 9, subfamily C (Na+-transporting carboxylic acid decarboxylase), member 1
Tssr138629 16 45535325 to 45535336 11 + TSS region transcription start site region 138629
Tssr138630 16 45535340 to 45535354 14 + TSS region transcription start site region 138630
Tssr138631 16 45610417 to 45610438 21 + TSS region transcription start site region 138631
Gcsam 16 45610440 to 45622867 12427 + protein coding gene germinal center associated, signaling and motility
Tssr138632 16 45610441 to 45610450 9 + TSS region transcription start site region 138632
Tssr138633 16 45610456 to 45610467 11 + TSS region transcription start site region 138633
BC016579 16 45626848 to 45654068 27220 - protein coding gene cDNA sequence, BC016579
Gm49585 16 45642357 to 45642548 191 + pseudogene predicted gene, 49585
Cpgi8296 16 45653904 to 45654275 371 CpG island CpG island 8296
Tssr141241 16 45654050 to 45654061 11 - TSS region transcription start site region 141241
Tssr141242 16 45654083 to 45654096 13 - TSS region transcription start site region 141242
Tmprss7 16 45656315 to 45693658 37343 - protein coding gene transmembrane serine protease 7