Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:45170734-45380743

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Atg3 16 45158785 to 45188538 29753 + protein coding gene autophagy related 3
Tssr138608 16 45171719 to 45171736 17 + TSS region transcription start site region 138608
Tssr141214 16 45173919 to 45173937 18 - TSS region transcription start site region 141214
Tssr138609 16 45184764 to 45184790 26 + TSS region transcription start site region 138609
Tssr138610 16 45201727 to 45201729 2 + TSS region transcription start site region 138610
Gm6030 16 45205100 to 45205489 389 + pseudogene predicted gene 6030
Btla 16 45223545 to 45252895 29350 + protein coding gene B and T lymphocyte associated
Tssr141215 16 45223725 to 45223735 10 - TSS region transcription start site region 141215
Tssr138611 16 45223939 to 45223951 12 + TSS region transcription start site region 138611
Tssr138612 16 45224074 to 45224085 11 + TSS region transcription start site region 138612
Tssr138613 16 45224112 to 45224123 11 + TSS region transcription start site region 138613
Tssr138614 16 45224128 to 45224139 11 + TSS region transcription start site region 138614
Tssr138615 16 45224144 to 45224169 25 + TSS region transcription start site region 138615
Tssr138616 16 45224171 to 45224192 21 + TSS region transcription start site region 138616
Tssr138617 16 45224325 to 45224346 21 + TSS region transcription start site region 138617
Tssr138618 16 45224357 to 45224364 7 + TSS region transcription start site region 138618
Tssr141216 16 45224529 to 45224534 5 - TSS region transcription start site region 141216
Tssr138619 16 45224582 to 45224593 11 + TSS region transcription start site region 138619
Tssr141217 16 45224819 to 45224831 12 - TSS region transcription start site region 141217
Tssr138620 16 45224945 to 45224958 13 + TSS region transcription start site region 138620
Tssr138621 16 45224977 to 45224988 11 + TSS region transcription start site region 138621
Tssr138622 16 45227267 to 45227309 42 + TSS region transcription start site region 138622
Tssr138623 16 45244976 to 45244979 3 + TSS region transcription start site region 138623
Tssr141218 16 45275734 to 45275743 9 - TSS region transcription start site region 141218
Gm30636 16 45338037 to 45362407 24370 - lncRNA gene predicted gene, 30636
9530002O20Rik 16 45357034 to 45358362 1328 unclassified gene RIKEN cDNA 9530002O20 gene
Gm30760 16 45362425 to 45366379 3954 - lncRNA gene predicted gene, 30760
Tssr141219 16 45372627 to 45372638 11 - TSS region transcription start site region 141219
Tssr138624 16 45372817 to 45372826 9 + TSS region transcription start site region 138624