Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:45088820-45228839

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57 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ccdc80 16 45093407 to 45127924 34517 + protein coding gene coiled-coil domain containing 80
Tssr138585 16 45093611 to 45093622 11 + TSS region transcription start site region 138585
Tssr138586 16 45093639 to 45093661 22 + TSS region transcription start site region 138586
Tssr138587 16 45093665 to 45093681 16 + TSS region transcription start site region 138587
Tssr138588 16 45093746 to 45093760 14 + TSS region transcription start site region 138588
Tssr4882 16 45093763 to 45093771 8 + TSS region transcription start site region 4882
Tssr138589 16 45093903 to 45093952 49 + TSS region transcription start site region 138589
Tssr138590 16 45094006 to 45094021 15 + TSS region transcription start site region 138590
Tssr138591 16 45094036 to 45094041 5 + TSS region transcription start site region 138591
Tssr138592 16 45094081 to 45094091 10 + TSS region transcription start site region 138592
Tssr138593 16 45094096 to 45094117 21 + TSS region transcription start site region 138593
Tssr138594 16 45094118 to 45094137 19 + TSS region transcription start site region 138594
Tssr4883 16 45094240 to 45094249 9 + TSS region transcription start site region 4883
Tssr138595 16 45094623 to 45094668 45 + TSS region transcription start site region 138595
D530031A16Rik 16 45119462 to 45120560 1098 unclassified gene RIKEN cDNA D530031A16 gene
Slc35a5 16 45139573 to 45158676 19103 - protein coding gene solute carrier family 35, member A5
Tssr141208 16 45148568 to 45148613 45 - TSS region transcription start site region 141208
Cpgi8294 16 45158082 to 45159436 1354 CpG island CpG island 8294
Tssr141209 16 45158273 to 45158286 13 - TSS region transcription start site region 141209
Tssr138596 16 45158378 to 45158390 12 + TSS region transcription start site region 138596
Tssr141210 16 45158515 to 45158520 5 - TSS region transcription start site region 141210
Tssr141211 16 45158592 to 45158612 20 - TSS region transcription start site region 141211
Tssr141212 16 45158624 to 45158645 21 - TSS region transcription start site region 141212
Tssr141213 16 45158650 to 45158683 33 - TSS region transcription start site region 141213
Tssr138597 16 45158725 to 45158810 85 + TSS region transcription start site region 138597
Atg3 16 45158785 to 45188538 29753 + protein coding gene autophagy related 3
Tssr138598 16 45158820 to 45158839 19 + TSS region transcription start site region 138598
Tssr138599 16 45158847 to 45158862 15 + TSS region transcription start site region 138599
Tssr138600 16 45158869 to 45158921 52 + TSS region transcription start site region 138600
Tssr138601 16 45158954 to 45159001 47 + TSS region transcription start site region 138601
Tssr138602 16 45159006 to 45159017 11 + TSS region transcription start site region 138602
Tssr138603 16 45159056 to 45159079 23 + TSS region transcription start site region 138603
Tssr138604 16 45159087 to 45159110 23 + TSS region transcription start site region 138604
Tssr138605 16 45162559 to 45162565 6 + TSS region transcription start site region 138605
Tssr138606 16 45163242 to 45163288 46 + TSS region transcription start site region 138606
Tssr138607 16 45169859 to 45169903 44 + TSS region transcription start site region 138607
Tssr138608 16 45171719 to 45171736 17 + TSS region transcription start site region 138608
Tssr141214 16 45173919 to 45173937 18 - TSS region transcription start site region 141214
Tssr138609 16 45184764 to 45184790 26 + TSS region transcription start site region 138609
Tssr138610 16 45201727 to 45201729 2 + TSS region transcription start site region 138610
Gm6030 16 45205100 to 45205489 389 + pseudogene predicted gene 6030
Btla 16 45223545 to 45252895 29350 + protein coding gene B and T lymphocyte associated
Tssr141215 16 45223725 to 45223735 10 - TSS region transcription start site region 141215
Tssr138611 16 45223939 to 45223951 12 + TSS region transcription start site region 138611
Tssr138612 16 45224074 to 45224085 11 + TSS region transcription start site region 138612
Tssr138613 16 45224112 to 45224123 11 + TSS region transcription start site region 138613
Tssr138614 16 45224128 to 45224139 11 + TSS region transcription start site region 138614
Tssr138615 16 45224144 to 45224169 25 + TSS region transcription start site region 138615
Tssr138616 16 45224171 to 45224192 21 + TSS region transcription start site region 138616
Tssr138617 16 45224325 to 45224346 21 + TSS region transcription start site region 138617
Tssr138618 16 45224357 to 45224364 7 + TSS region transcription start site region 138618
Tssr141216 16 45224529 to 45224534 5 - TSS region transcription start site region 141216
Tssr138619 16 45224582 to 45224593 11 + TSS region transcription start site region 138619
Tssr141217 16 45224819 to 45224831 12 - TSS region transcription start site region 141217
Tssr138620 16 45224945 to 45224958 13 + TSS region transcription start site region 138620
Tssr138621 16 45224977 to 45224988 11 + TSS region transcription start site region 138621
Tssr138622 16 45227267 to 45227309 42 + TSS region transcription start site region 138622