MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 16:44329771-44459804

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Sidt1	16	44240180 to 44333196	93016	-	protein coding gene	SID1 transmembrane family, member 1
Gm26732	16	44329997 to 44333050	3053	+	lincRNA gene	predicted gene, 26732
Cpgi8286	16	44331951 to 44332936	985		CpG island	CpG island 8286
Tssr141181	16	44332625 to 44332668	43	-	TSS region	transcription start site region 141181
Tssr141182	16	44332669 to 44332686	17	-	TSS region	transcription start site region 141182
Tssr141183	16	44332703 to 44332714	11	-	TSS region	transcription start site region 141183
Tssr141184	16	44332842 to 44332868	26	-	TSS region	transcription start site region 141184
Tssr141185	16	44332925 to 44333004	79	-	TSS region	transcription start site region 141185
Tssr141186	16	44333010 to 44333026	16	-	TSS region	transcription start site region 141186
Tssr141187	16	44333135 to 44333157	22	-	TSS region	transcription start site region 141187
Cpgi8287	16	44347121 to 44347921	800		CpG island	CpG island 8287
Tssr138550	16	44347396 to 44347479	83	+	TSS region	transcription start site region 138550
Spice1	16	44347399 to 44388492	41093	+	protein coding gene	spindle and centriole associated protein 1
Tssr138551	16	44394771 to 44394804	33	+	TSS region	transcription start site region 138551
Cfap44	16	44394796 to 44482428	87632	+	protein coding gene	cilia and flagella associated protein 44
Tssr138552	16	44394805 to 44394826	21	+	TSS region	transcription start site region 138552
Cpgi8288	16	44404067 to 44404415	348		CpG island	CpG island 8288
Gm41455	16	44450978 to 44484881	33903	-	lncRNA gene	predicted gene, 41455