Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:44220180-44353196

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Usf3	16	44173246 to 44227465	54219	+	protein coding gene	upstream transcription factor family member 3
Sidt1	16	44240180 to 44333196	93016	-	protein coding gene	SID1 transmembrane family, member 1
Tssr141180	16	44262852 to 44262862	10	-	TSS region	transcription start site region 141180
Cpgi8285	16	44299548 to 44299804	256		CpG island	CpG island 8285
Nhil2	16	44321447 to 44986117	664670		QTL	non-heme iron levels 2
D16Mit379	16	44321447 to 44321571	124		DNA segment	DNA segment, Chr 16, Massachusetts Institute of Technology 379
Gm26732	16	44329997 to 44333050	3053	+	lincRNA gene	predicted gene, 26732
Cpgi8286	16	44331951 to 44332936	985		CpG island	CpG island 8286
Tssr141181	16	44332625 to 44332668	43	-	TSS region	transcription start site region 141181
Tssr141182	16	44332669 to 44332686	17	-	TSS region	transcription start site region 141182
Tssr141183	16	44332703 to 44332714	11	-	TSS region	transcription start site region 141183
Tssr141184	16	44332842 to 44332868	26	-	TSS region	transcription start site region 141184
Tssr141185	16	44332925 to 44333004	79	-	TSS region	transcription start site region 141185
Tssr141186	16	44333010 to 44333026	16	-	TSS region	transcription start site region 141186
Tssr141187	16	44333135 to 44333157	22	-	TSS region	transcription start site region 141187
Cpgi8287	16	44347121 to 44347921	800		CpG island	CpG island 8287
Tssr138550	16	44347396 to 44347479	83	+	TSS region	transcription start site region 138550
Spice1	16	44347399 to 44388492	41093	+	protein coding gene	spindle and centriole associated protein 1