Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:4420531-4920581

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117 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi7909 16 4419010 to 4420903 1893 CpG island CpG island 7909
Cpgi7910 16 4474923 to 4475464 541 CpG island CpG island 7910
Tssr139768 16 4475125 to 4475159 34 - TSS region transcription start site region 139768
Tssr139769 16 4475161 to 4475222 61 - TSS region transcription start site region 139769
Srl 16 4480216 to 4541816 61600 - protein coding gene sarcalumenin
Tssr139770 16 4509591 to 4509596 5 - TSS region transcription start site region 139770
Tssr139771 16 4523056 to 4523075 19 - TSS region transcription start site region 139771
Tssr139772 16 4523559 to 4523573 14 - TSS region transcription start site region 139772
Gm15885 16 4539308 to 4539695 387 + pseudogene predicted gene 15885
Cpgi7911 16 4541609 to 4542166 557 CpG island CpG island 7911
Tssr139773 16 4541764 to 4541779 15 - TSS region transcription start site region 139773
Tssr139774 16 4541794 to 4541839 45 - TSS region transcription start site region 139774
Tfap4 16 4544661 to 4559854 15193 - protein coding gene transcription factor AP4
Tssr139775 16 4549406 to 4549436 30 - TSS region transcription start site region 139775
Cpgi7912 16 4558049 to 4561009 2960 CpG island CpG island 7912
Tssr136855 16 4558107 to 4558142 35 + TSS region transcription start site region 136855
Tssr139776 16 4558607 to 4558649 42 - TSS region transcription start site region 139776
Tssr136856 16 4558697 to 4558741 44 + TSS region transcription start site region 136856
Tssr136857 16 4558749 to 4558763 14 + TSS region transcription start site region 136857
Tssr139777 16 4559608 to 4559681 73 - TSS region transcription start site region 139777
Tssr139778 16 4559721 to 4559747 26 - TSS region transcription start site region 139778
Tssr139779 16 4559777 to 4559825 48 - TSS region transcription start site region 139779
Tssr139780 16 4560087 to 4560101 14 - TSS region transcription start site region 139780
Cpgi7913 16 4586498 to 4587098 600 CpG island CpG island 7913
D330022H12Rik 16 4592252 to 4594481 2229 - lncRNA gene RIKEN cDNA D330022H12 gene
Cpgi7914 16 4593804 to 4595667 1863 CpG island CpG island 7914
Tssr136858 16 4594683 to 4594735 52 + TSS region transcription start site region 136858
Glis2 16 4594713 to 4624924 30211 + protein coding gene GLIS family zinc finger 2
Tssr136859 16 4594740 to 4594759 19 + TSS region transcription start site region 136859
Tssr136860 16 4594853 to 4594884 31 + TSS region transcription start site region 136860
Pam16 16 4616464 to 4624988 8524 - protein coding gene presequence translocase-asssociated motor 16 homolog (S. cerevisiae)
Cpgi7915 16 4624297 to 4625115 818 CpG island CpG island 7915
Tssr139781 16 4624938 to 4624972 34 - TSS region transcription start site region 139781
Tssr139782 16 4624984 to 4624991 7 - TSS region transcription start site region 139782
Coro7 16 4626884 to 4679720 52836 - protein coding gene coronin 7
D16Mit180 16 4631112 to 4631218 106 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 180
Tssr139783 16 4634376 to 4634426 50 - TSS region transcription start site region 139783
Tssr139784 16 4635413 to 4635453 40 - TSS region transcription start site region 139784
Tssr136861 16 4639937 to 4639944 7 + TSS region transcription start site region 136861
Vasn 16 4639941 to 4650802 10861 + protein coding gene vasorin
Tssr136862 16 4639956 to 4639978 22 + TSS region transcription start site region 136862
Cpgi7916 16 4640032 to 4640442 410 CpG island CpG island 7916
Tssr136863 16 4649166 to 4649180 14 + TSS region transcription start site region 136863
Tssr139785 16 4670531 to 4670581 50 - TSS region transcription start site region 139785
Cpgi7917 16 4679146 to 4679957 811 CpG island CpG island 7917
Tssr139786 16 4679660 to 4679699 39 - TSS region transcription start site region 139786
Tssr139787 16 4679703 to 4679747 44 - TSS region transcription start site region 139787
Tssr136864 16 4679826 to 4679834 8 + TSS region transcription start site region 136864
Cpgi7918 16 4683689 to 4684603 914 CpG island CpG island 7918
Dnaja3 16 4684070 to 4707695 23625 + protein coding gene DnaJ heat shock protein family (Hsp40) member A3
Tssr136865 16 4684099 to 4684137 38 + TSS region transcription start site region 136865
Tssr136866 16 4684229 to 4684236 7 + TSS region transcription start site region 136866
Tssr136867 16 4701182 to 4701195 13 + TSS region transcription start site region 136867
Tssr136868 16 4707125 to 4707130 5 + TSS region transcription start site region 136868
Nmral1 16 4711317 to 4719356 8039 - protein coding gene NmrA-like family domain containing 1
Tssr139788 16 4719043 to 4719054 11 - TSS region transcription start site region 139788
Tssr139789 16 4719078 to 4719126 48 - TSS region transcription start site region 139789
Tssr139790 16 4719128 to 4719146 18 - TSS region transcription start site region 139790
Tssr139791 16 4719148 to 4719164 16 - TSS region transcription start site region 139791
Cpgi7919 16 4726099 to 4727282 1183 CpG island CpG island 7919
Tssr136869 16 4726284 to 4726290 6 + TSS region transcription start site region 136869
Tssr136870 16 4726357 to 4726370 13 + TSS region transcription start site region 136870
Hmox2 16 4726361 to 4766741 40380 + protein coding gene heme oxygenase 2
Tssr136871 16 4726374 to 4726439 65 + TSS region transcription start site region 136871
Gm15859 16 4729869 to 4730809 940 + antisense lncRNA gene predicted gene 15859
Tssr136872 16 4731215 to 4731217 2 + TSS region transcription start site region 136872
Tssr136873 16 4734972 to 4734976 4 + TSS region transcription start site region 136873
Tssr136874 16 4738722 to 4738723 1 + TSS region transcription start site region 136874
Tssr136875 16 4741543 to 4741592 49 + TSS region transcription start site region 136875
Tssr136876 16 4741594 to 4741630 36 + TSS region transcription start site region 136876
Tssr136877 16 4756879 to 4756881 2 + TSS region transcription start site region 136877
Cpgi7920 16 4756915 to 4757115 200 CpG island CpG island 7920
Tssr136878 16 4762616 to 4762631 15 + TSS region transcription start site region 136878
Cdip1 16 4765461 to 4790287 24826 - protein coding gene cell death inducing Trp53 target 1
Tssr139792 16 4769673 to 4769691 18 - TSS region transcription start site region 139792
Tssr139793 16 4769723 to 4769742 19 - TSS region transcription start site region 139793
Gm15835 16 4777743 to 4779454 1711 + lincRNA gene predicted gene 15835
Cpgi7921 16 4789315 to 4790510 1195 CpG island CpG island 7921
Tssr139794 16 4789865 to 4789885 20 - TSS region transcription start site region 139794
Tssr139795 16 4789887 to 4789949 62 - TSS region transcription start site region 139795
Tssr139796 16 4789984 to 4789995 11 - TSS region transcription start site region 139796
Tssr139797 16 4790000 to 4790009 9 - TSS region transcription start site region 139797
Tssr139798 16 4790187 to 4790203 16 - TSS region transcription start site region 139798
Tssr139799 16 4790205 to 4790216 11 - TSS region transcription start site region 139799
Tssr139800 16 4790220 to 4790300 80 - TSS region transcription start site region 139800
Tssr139801 16 4829283 to 4829319 36 - TSS region transcription start site region 139801
Tssr136879 16 4835406 to 4835422 16 + TSS region transcription start site region 136879
4930562C15Rik 16 4835416 to 4867686 32270 + protein coding gene RIKEN cDNA 4930562C15 gene
Tssr136880 16 4835432 to 4835457 25 + TSS region transcription start site region 136880
Gm10914 16 4869216 to 4870624 1408 - unclassified gene predicted gene 10914
Tssr139802 16 4870690 to 4870697 7 - TSS region transcription start site region 139802
Ubald1 16 4874779 to 4879851 5072 - protein coding gene UBA-like domain containing 1
Tssr139803 16 4875735 to 4875753 18 - TSS region transcription start site region 139803
Tssr139804 16 4875828 to 4875846 18 - TSS region transcription start site region 139804
Tssr139805 16 4878310 to 4878313 3 - TSS region transcription start site region 139805
Tssr139806 16 4878334 to 4878352 18 - TSS region transcription start site region 139806
Cpgi7922 16 4879006 to 4881106 2100 CpG island CpG island 7922
Tssr139807 16 4879042 to 4879053 11 - TSS region transcription start site region 139807
Tssr139808 16 4879789 to 4879803 14 - TSS region transcription start site region 139808
Tssr139809 16 4879810 to 4879836 26 - TSS region transcription start site region 139809
Tssr139810 16 4879849 to 4879864 15 - TSS region transcription start site region 139810
Tssr139811 16 4879872 to 4879892 20 - TSS region transcription start site region 139811
Tssr139812 16 4880160 to 4880178 18 - TSS region transcription start site region 139812
Tssr139813 16 4880264 to 4880275 11 - TSS region transcription start site region 139813
Tssr139814 16 4880284 to 4880302 18 - TSS region transcription start site region 139814
Tssr139815 16 4880447 to 4880479 32 - TSS region transcription start site region 139815
Tssr136881 16 4880674 to 4880710 36 + TSS region transcription start site region 136881
Cpgi7923 16 4885869 to 4886943 1074 CpG island CpG island 7923
Tssr136882 16 4886135 to 4886150 15 + TSS region transcription start site region 136882
Tssr136883 16 4886200 to 4886205 5 + TSS region transcription start site region 136883
Tssr136884 16 4886208 to 4886219 11 + TSS region transcription start site region 136884
Tssr136885 16 4886239 to 4886268 29 + TSS region transcription start site region 136885
Mgrn1 16 4886249 to 4938296 52047 + protein coding gene mahogunin, ring finger 1
Tssr136886 16 4886271 to 4886284 13 + TSS region transcription start site region 136886
Tssr136887 16 4886302 to 4886320 18 + TSS region transcription start site region 136887
Tssr136888 16 4908709 to 4908712 3 + TSS region transcription start site region 136888
Tssr136889 16 4913182 to 4913215 33 + TSS region transcription start site region 136889