Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:43981565-44191580

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52 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
4930552F14Rik 16 43979342 to 43983353 4011 unclassified gene RIKEN cDNA 4930552F14 gene
Gm46552 16 43979873 to 43983352 3479 + lncRNA gene predicted gene, 46552
Gramd1c 16 43980350 to 44063345 82995 - protein coding gene GRAM domain containing 1C
Mir3470b 16 44013852 to 44013977 125 + miRNA gene microRNA 3470b
Tssr141156 16 44016319 to 44016384 65 - TSS region transcription start site region 141156
Tssr141157 16 44016387 to 44016399 12 - TSS region transcription start site region 141157
Tssr141158 16 44027932 to 44027937 5 - TSS region transcription start site region 141158
Tssr141159 16 44027938 to 44027969 31 - TSS region transcription start site region 141159
Cpgi8280 16 44027940 to 44028095 155 CpG island CpG island 8280
Tssr141160 16 44027983 to 44027996 13 - TSS region transcription start site region 141160
Tssr141161 16 44061469 to 44061479 10 - TSS region transcription start site region 141161
Tssr141162 16 44061481 to 44061484 3 - TSS region transcription start site region 141162
Tssr141163 16 44061493 to 44061506 13 - TSS region transcription start site region 141163
Cpgi8281 16 44062998 to 44063532 534 CpG island CpG island 8281
Tssr141164 16 44065359 to 44065379 20 - TSS region transcription start site region 141164
Atp6v1a 16 44085402 to 44139705 54303 - protein coding gene ATPase, H+ transporting, lysosomal V1 subunit A
Tssr141165 16 44085996 to 44086017 21 - TSS region transcription start site region 141165
Tssr141166 16 44086094 to 44086110 16 - TSS region transcription start site region 141166
Tssr141167 16 44086565 to 44086580 15 - TSS region transcription start site region 141167
Tssr141168 16 44106194 to 44106196 2 - TSS region transcription start site region 141168
Tssr138534 16 44123540 to 44123559 19 + TSS region transcription start site region 138534
Tssr138535 16 44123566 to 44123575 9 + TSS region transcription start site region 138535
Tssr138536 16 44136808 to 44136819 11 + TSS region transcription start site region 138536
Cpgi8282 16 44138587 to 44140745 2158 CpG island CpG island 8282
Tssr141169 16 44138975 to 44138994 19 - TSS region transcription start site region 141169
Tssr141170 16 44139003 to 44139026 23 - TSS region transcription start site region 141170
Tssr141171 16 44139033 to 44139050 17 - TSS region transcription start site region 141171
Tssr141172 16 44139055 to 44139077 22 - TSS region transcription start site region 141172
Tssr138537 16 44139149 to 44139161 12 + TSS region transcription start site region 138537
Tssr141173 16 44139259 to 44139283 24 - TSS region transcription start site region 141173
Tssr141174 16 44139631 to 44139654 23 - TSS region transcription start site region 141174
Tssr141175 16 44139682 to 44139720 38 - TSS region transcription start site region 141175
Tssr141176 16 44139757 to 44139766 9 - TSS region transcription start site region 141176
Tssr138538 16 44139821 to 44139900 79 + TSS region transcription start site region 138538
Naa50 16 44139830 to 44163366 23536 + protein coding gene N(alpha)-acetyltransferase 50, NatE catalytic subunit
Tssr141177 16 44140497 to 44140508 11 - TSS region transcription start site region 141177
Tssr141178 16 44140521 to 44140556 35 - TSS region transcription start site region 141178
Tssr141179 16 44140570 to 44140584 14 - TSS region transcription start site region 141179
Tssr138539 16 44142619 to 44142630 11 + TSS region transcription start site region 138539
Tssr138540 16 44146318 to 44146322 4 + TSS region transcription start site region 138540
Tssr138541 16 44156421 to 44156443 22 + TSS region transcription start site region 138541
Tssr138542 16 44159690 to 44159726 36 + TSS region transcription start site region 138542
Tssr138543 16 44159749 to 44159765 16 + TSS region transcription start site region 138543
Tssr138544 16 44160101 to 44160114 13 + TSS region transcription start site region 138544
Tssr138545 16 44160306 to 44160325 19 + TSS region transcription start site region 138545
Tssr138546 16 44160342 to 44160368 26 + TSS region transcription start site region 138546
Tssr138547 16 44161352 to 44161399 47 + TSS region transcription start site region 138547
Cpgi8283 16 44172904 to 44173900 996 CpG island CpG island 8283
Tssr138548 16 44173239 to 44173270 31 + TSS region transcription start site region 138548
Usf3 16 44173246 to 44227465 54219 + protein coding gene upstream transcription factor family member 3
Tssr138549 16 44173271 to 44173294 23 + TSS region transcription start site region 138549
D16Mit198 16 44188691 to 44188804 113 DNA segment DNA Segment, Chr 16, Massachusetts Institute of Technology 198