Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:42965975-43505986

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D16Mit40 16 42998528 to 42998682 154 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 40
Tssr138478 16 43072166 to 43072172 6 + TSS region transcription start site region 138478
Tssr138479 16 43072194 to 43072209 15 + TSS region transcription start site region 138479
Tssr138480 16 43072222 to 43072233 11 + TSS region transcription start site region 138480
Gm25873 16 43126233 to 43126339 106 + snRNA gene predicted gene, 25873
Tssr138481 16 43176797 to 43176803 6 + TSS region transcription start site region 138481
Gm15712 16 43184579 to 43185728 1149 + pseudogene predicted gene 15712
Tssr138482 16 43230733 to 43230771 38 + TSS region transcription start site region 138482
Tssr138483 16 43235856 to 43235876 20 + TSS region transcription start site region 138483
Tssr138484 16 43235924 to 43235937 13 + TSS region transcription start site region 138484
Tssr4878 16 43235953 to 43235963 10 + TSS region transcription start site region 4878
Tssr138485 16 43235975 to 43235986 11 + TSS region transcription start site region 138485
Tssr138486 16 43236020 to 43236041 21 + TSS region transcription start site region 138486
Tssr138487 16 43247278 to 43247309 31 + TSS region transcription start site region 138487
Tssr138488 16 43253701 to 43253704 3 + TSS region transcription start site region 138488
Tssr138489 16 43299314 to 43299324 10 + TSS region transcription start site region 138489
Tssr138490 16 43302393 to 43302406 13 + TSS region transcription start site region 138490
Gm37946 16 43307935 to 43308281 346 - unclassified gene predicted gene, 37946
Gm15711 16 43312594 to 43313128 534 + pseudogene predicted gene 15711
Gm9968 16 43345887 to 43363666 17779 - antisense lncRNA gene predicted gene 9968
Tssr138491 16 43363013 to 43363024 11 + TSS region transcription start site region 138491
Tssr138492 16 43363039 to 43363073 34 + TSS region transcription start site region 138492
Tssr141138 16 43363061 to 43363068 7 - TSS region transcription start site region 141138
Tssr138493 16 43363077 to 43363129 52 + TSS region transcription start site region 138493
Tssr138494 16 43363724 to 43363729 5 + TSS region transcription start site region 138494
Tssr138495 16 43363855 to 43363888 33 + TSS region transcription start site region 138495
Tssr138496 16 43363899 to 43363917 18 + TSS region transcription start site region 138496
Tssr138497 16 43363923 to 43363934 11 + TSS region transcription start site region 138497
Tssr138498 16 43363990 to 43364017 27 + TSS region transcription start site region 138498
Tssr138499 16 43364102 to 43364139 37 + TSS region transcription start site region 138499
Tssr138500 16 43364145 to 43364157 12 + TSS region transcription start site region 138500
Tssr138501 16 43399208 to 43399220 12 + TSS region transcription start site region 138501
Gm15713 16 43410518 to 43420196 9678 - antisense lncRNA gene predicted gene 15713
D16Mit39 16 43457475 to 43457602 127 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 39
Tssr138502 16 43474226 to 43474241 15 + TSS region transcription start site region 138502
Tssr138503 16 43474291 to 43474294 3 + TSS region transcription start site region 138503
D230002P11Rik 16 43478718 to 43483030 4312 unclassified gene RIKEN cDNA D230002P11 gene
Tssr138504 16 43503304 to 43503323 19 + TSS region transcription start site region 138504
Tssr138505 16 43503380 to 43503457 77 + TSS region transcription start site region 138505
Tssr138506 16 43503481 to 43503521 40 + TSS region transcription start site region 138506
Tssr138507 16 43503607 to 43503626 19 + TSS region transcription start site region 138507