Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:42418926-42909135

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D16Mit137 16 42482762 to 42482880 118 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 137
4930429N05Rik 16 42493228 to 42495139 1911 unclassified gene RIKEN cDNA 4930429N05 gene
5430434N17Rik 16 42509461 to 42510878 1417 unclassified gene RIKEN cDNA 5430434N17 gene
Gm29960 16 42641864 to 42652620 10756 - lncRNA gene predicted gene, 29960
Gm49739 16 42663926 to 42664135 209 + pseudogene predicted gene, 49739
4932412D23Rik 16 42725702 to 42875762 150060 - lincRNA gene RIKEN cDNA 4932412D23 gene
Tssr138462 16 42750763 to 42750764 1 + TSS region transcription start site region 138462
D16Mit83 16 42808595 to 42808785 190 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 83
D16Mit41 16 42871889 to 42872019 130 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 41
Cpgi8275 16 42874877 to 42876712 1835 CpG island CpG island 8275
Tssr141136 16 42875714 to 42875757 43 - TSS region transcription start site region 141136
Tssr138463 16 42875805 to 42875827 22 + TSS region transcription start site region 138463
Tssr138464 16 42875839 to 42875861 22 + TSS region transcription start site region 138464
Zbtb20 16 42875881 to 43642602 766721 + protein coding gene zinc finger and BTB domain containing 20
Tssr138465 16 42875882 to 42875903 21 + TSS region transcription start site region 138465
Gm19522 16 42884370 to 42912065 27695 - antisense lncRNA gene predicted gene, 19522
Tssr138466 16 42907441 to 42907478 37 + TSS region transcription start site region 138466
Tssr138467 16 42907543 to 42907562 19 + TSS region transcription start site region 138467
Tssr138468 16 42907563 to 42907684 121 + TSS region transcription start site region 138468
Tssr138469 16 42908601 to 42908621 20 + TSS region transcription start site region 138469