Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:4214010-4625903

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi7906 16 4212787 to 4214764 1977 CpG island CpG island 7906
Tssr139761 16 4214034 to 4214070 36 - TSS region transcription start site region 139761
4930455F16Rik 16 4219912 to 4229116 9204 - lncRNA gene RIKEN cDNA 4930455F16 gene
Tssr139762 16 4229111 to 4229120 9 - TSS region transcription start site region 139762
Gm5766 16 4229229 to 4231205 1976 + pseudogene predicted gene 5766
Cpgi7907 16 4239516 to 4240135 619 CpG island CpG island 7907
Gm36359 16 4264712 to 4279996 15284 - lncRNA gene predicted gene, 36359
Tssr136851 16 4265698 to 4265706 8 + TSS region transcription start site region 136851
Cpgi7908 16 4267921 to 4268558 637 CpG island CpG island 7908
Tssr136852 16 4276399 to 4276410 11 + TSS region transcription start site region 136852
Tssr136853 16 4276531 to 4276549 18 + TSS region transcription start site region 136853
Adcy9 16 4287529 to 4420498 132969 - protein coding gene adenylate cyclase 9
Gm6142 16 4320356 to 4320680 324 - pseudogene predicted pseudogene 6142
Tssr139763 16 4320652 to 4320663 11 - TSS region transcription start site region 139763
Tssr139764 16 4320710 to 4320711 1 - TSS region transcription start site region 139764
Tssr139765 16 4374984 to 4374998 14 - TSS region transcription start site region 139765
Tssr136854 16 4381731 to 4381749 18 + TSS region transcription start site region 136854
Cpgi7909 16 4419010 to 4420903 1893 CpG island CpG island 7909
Tssr139766 16 4420380 to 4420399 19 - TSS region transcription start site region 139766
Tssr139767 16 4420416 to 4420441 25 - TSS region transcription start site region 139767
Cpgi7910 16 4474923 to 4475464 541 CpG island CpG island 7910
Tssr139768 16 4475125 to 4475159 34 - TSS region transcription start site region 139768
Tssr139769 16 4475161 to 4475222 61 - TSS region transcription start site region 139769
Srl 16 4480216 to 4541816 61600 - protein coding gene sarcalumenin
Tssr139770 16 4509591 to 4509596 5 - TSS region transcription start site region 139770
Tssr139771 16 4523056 to 4523075 19 - TSS region transcription start site region 139771
Tssr139772 16 4523559 to 4523573 14 - TSS region transcription start site region 139772
Gm15885 16 4539308 to 4539695 387 + pseudogene predicted gene 15885
Cpgi7911 16 4541609 to 4542166 557 CpG island CpG island 7911
Tssr139773 16 4541764 to 4541779 15 - TSS region transcription start site region 139773
Tssr139774 16 4541794 to 4541839 45 - TSS region transcription start site region 139774
Tfap4 16 4544661 to 4559854 15193 - protein coding gene transcription factor AP4
Tssr139775 16 4549406 to 4549436 30 - TSS region transcription start site region 139775
Cpgi7912 16 4558049 to 4561009 2960 CpG island CpG island 7912
Tssr136855 16 4558107 to 4558142 35 + TSS region transcription start site region 136855
Tssr139776 16 4558607 to 4558649 42 - TSS region transcription start site region 139776
Tssr136856 16 4558697 to 4558741 44 + TSS region transcription start site region 136856
Tssr136857 16 4558749 to 4558763 14 + TSS region transcription start site region 136857
Tssr139777 16 4559608 to 4559681 73 - TSS region transcription start site region 139777
Tssr139778 16 4559721 to 4559747 26 - TSS region transcription start site region 139778
Tssr139779 16 4559777 to 4559825 48 - TSS region transcription start site region 139779
Tssr139780 16 4560087 to 4560101 14 - TSS region transcription start site region 139780
Cpgi7913 16 4586498 to 4587098 600 CpG island CpG island 7913
D330022H12Rik 16 4592252 to 4594481 2229 - lncRNA gene RIKEN cDNA D330022H12 gene
Cpgi7914 16 4593804 to 4595667 1863 CpG island CpG island 7914
Tssr136858 16 4594683 to 4594735 52 + TSS region transcription start site region 136858
Glis2 16 4594713 to 4624924 30211 + protein coding gene GLIS family zinc finger 2
Tssr136859 16 4594740 to 4594759 19 + TSS region transcription start site region 136859
Tssr136860 16 4594853 to 4594884 31 + TSS region transcription start site region 136860
Pam16 16 4616464 to 4624988 8524 - protein coding gene presequence translocase-asssociated motor 16 homolog (S. cerevisiae)
Cpgi7915 16 4624297 to 4625115 818 CpG island CpG island 7915
Tssr139781 16 4624938 to 4624972 34 - TSS region transcription start site region 139781
Tssr139782 16 4624984 to 4624991 7 - TSS region transcription start site region 139782