Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:41594741-42354757

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lsamp 16 41532779 to 42181679 648900 + protein coding gene limbic system-associated membrane protein
Tssr138451 16 41640001 to 41640013 12 + TSS region transcription start site region 138451
Tssr138452 16 41666309 to 41666320 11 + TSS region transcription start site region 138452
Tssr138453 16 41680966 to 41680971 5 + TSS region transcription start site region 138453
Tssr138454 16 41801853 to 41801854 1 + TSS region transcription start site region 138454
Tssr138455 16 41830533 to 41830536 3 + TSS region transcription start site region 138455
Gm46551 16 41832199 to 41841980 9781 - lncRNA gene predicted gene, 46551
Tssr138456 16 41974741 to 41974757 16 + TSS region transcription start site region 138456
Tssr138457 16 41988451 to 41988469 18 + TSS region transcription start site region 138457
Tssr138458 16 42149188 to 42149192 4 + TSS region transcription start site region 138458
Tssr138459 16 42166751 to 42166754 3 + TSS region transcription start site region 138459
Tssr138460 16 42180449 to 42180454 5 + TSS region transcription start site region 138460
Gm49737 16 42184772 to 42184917 145 - pseudogene predicted gene, 49737
Cpgi8273 16 42190180 to 42190657 477 CpG island CpG island 8273
Gm49738 16 42196691 to 42197402 711 - pseudogene predicted gene, 49738
Gap43 16 42248552 to 42340651 92099 - protein coding gene growth associated protein 43
Tssr141129 16 42249059 to 42249072 13 - TSS region transcription start site region 141129
Tssr138461 16 42258107 to 42258149 42 + TSS region transcription start site region 138461
Tssr141130 16 42290972 to 42290977 5 - TSS region transcription start site region 141130
Tssr141131 16 42292138 to 42292153 15 - TSS region transcription start site region 141131
Mir6540 16 42303362 to 42303469 107 - miRNA gene microRNA 6540
Cpgi8274 16 42313583 to 42313908 325 CpG island CpG island 8274
Tssr141132 16 42340504 to 42340564 60 - TSS region transcription start site region 141132
Tssr141133 16 42340584 to 42340591 7 - TSS region transcription start site region 141133
Tssr141134 16 42340595 to 42340630 35 - TSS region transcription start site region 141134
Tssr141135 16 42340696 to 42340723 27 - TSS region transcription start site region 141135
Tssr4876 16 42350386 to 42350387 1 + TSS region transcription start site region 4876