Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:39297836-41437937

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44 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm41454 16 39363932 to 39391440 27508 + lncRNA gene predicted gene, 41454
Gm29855 16 39401834 to 39453569 51735 - lncRNA gene predicted gene, 29855
Gm36903 16 39446749 to 39488234 41485 + lincRNA gene predicted gene, 36903
Gm24795 16 39455015 to 39455135 120 + miRNA gene predicted gene, 24795
D16Mit135 16 39619313 to 39619462 149 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 135
Tssr138430 16 39777713 to 39777715 2 + TSS region transcription start site region 138430
D16Mit82 16 39783968 to 39784087 119 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 82
D16Dcr6 16 39792691 to 39792787 96 DNA segment DNA Segment, Chr 16, Derry C. Roopenian 6
Gm8609 16 39934002 to 39934999 997 + pseudogene predicted gene 8609
Cpgi8271 16 39984264 to 39984987 723 CpG island CpG island 8271
Tssr138431 16 39984308 to 39984343 35 + TSS region transcription start site region 138431
Tssr138432 16 39984349 to 39984380 31 + TSS region transcription start site region 138432
Tssr138433 16 39984545 to 39984556 11 + TSS region transcription start site region 138433
Tssr138434 16 39984592 to 39984622 30 + TSS region transcription start site region 138434
D16Mit147 16 39999831 to 39999967 136 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 147
Tssr138435 16 40019362 to 40019364 2 + TSS region transcription start site region 138435
Gm16498 16 40069990 to 40073156 3166 unclassified gene predicted gene 16498
B230114A03Rik 16 40095913 to 40097128 1215 unclassified gene RIKEN cDNA B230114A03 gene
Tssr138436 16 40119973 to 40119977 4 + TSS region transcription start site region 138436
Gm37508 16 40127468 to 40127510 42 + unclassified gene predicted gene, 37508
Tssr138437 16 40194725 to 40194726 1 + TSS region transcription start site region 138437
Skts-fp3 16 40233519 to 73127497 32893978 QTL skin tumor susceptibility in FVB and PWK 3
D16Mit195 16 40233519 to 40233624 105 DNA segment DNA Segment, Chr 16, Massachusetts Institute of Technology 195
Gm22543 16 40306219 to 40306312 93 + snRNA gene predicted gene, 22543
Gm36939 16 40309433 to 40309871 438 + unclassified gene predicted gene, 36939
Gm27887 16 40367836 to 40367937 101 - miRNA gene predicted gene, 27887
Gm18235 16 40399484 to 40400742 1258 - pseudogene predicted gene, 18235
Tssr138438 16 40495712 to 40495715 3 + TSS region transcription start site region 138438
Eae41 16 40578772 to 78218584 37639812 QTL experimental allergic encephalomyelitis susceptibility 41
D16Mit194 16 40578772 to 40578894 122 DNA segment DNA Segment, Chr 16, Massachusetts Institute of Technology 194
D16Mit136 16 40656188 to 40656316 128 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 136
Tssr138439 16 40908184 to 40908190 6 + TSS region transcription start site region 138439
Tssr138440 16 41020136 to 41020142 6 + TSS region transcription start site region 138440
Gm27717 16 41066426 to 41066576 150 - unclassified non-coding RNA gene predicted gene, 27717
A330053N03Rik 16 41111015 to 41115880 4865 unclassified gene RIKEN cDNA A330053N03 gene
D930030D11Rik 16 41206969 to 41209394 2425 unclassified gene RIKEN cDNA D930030D11 gene
Gm26381 16 41217745 to 41217836 91 + rRNA gene predicted gene, 26381
Gm47276 16 41217777 to 41217836 59 + miRNA gene predicted gene, 47276
2900006G07Rik 16 41222159 to 41222631 472 unclassified gene RIKEN cDNA 2900006G07 gene
Tssr138441 16 41290797 to 41290801 4 + TSS region transcription start site region 138441
Gm27587 16 41299734 to 41299896 162 - unclassified non-coding RNA gene predicted gene, 27587
D16Mit38 16 41393834 to 41394016 182 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 38
D16Mit38.1 16 41393955 to 41394076 121 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 38.1
Gm28750 16 41413166 to 41431092 17926 - antisense lncRNA gene predicted gene 28750