Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:38590315-38780869

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tmem39a 16 38558698 to 38592162 33464 + protein coding gene transmembrane protein 39a
Arhgap31 16 38598343 to 38713035 114692 - protein coding gene Rho GTPase activating protein 31
Tssr141089 16 38600049 to 38600061 12 - TSS region transcription start site region 141089
Tssr141090 16 38602656 to 38602698 42 - TSS region transcription start site region 141090
Cpgi8266 16 38608971 to 38609311 340 CpG island CpG island 8266
D16Ium68 16 38612538 to 38612708 170 DNA segment DNA segment, Chr 16, Indiana University Medical 68
Gm36482 16 38614651 to 38653040 38389 + lncRNA gene predicted gene, 36482
Tssr141091 16 38622347 to 38622363 16 - TSS region transcription start site region 141091
Tssr141092 16 38622366 to 38622384 18 - TSS region transcription start site region 141092
Tssr141093 16 38636920 to 38636954 34 - TSS region transcription start site region 141093
Tssr138405 16 38651329 to 38651332 3 + TSS region transcription start site region 138405
Tssr138406 16 38661710 to 38661715 5 + TSS region transcription start site region 138406
Cpgi8267 16 38673578 to 38673772 194 CpG island CpG island 8267
Tssr141094 16 38678407 to 38678418 11 - TSS region transcription start site region 141094
Gm15530 16 38685315 to 38685869 554 - pseudogene predicted gene 15530
Tssr141095 16 38703684 to 38703693 9 - TSS region transcription start site region 141095
Tssr141096 16 38705820 to 38705824 4 - TSS region transcription start site region 141096
Tssr141097 16 38709708 to 38709718 10 - TSS region transcription start site region 141097
D16Mit90 16 38710883 to 38710979 96 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 90
Tssr138407 16 38712174 to 38712178 4 + TSS region transcription start site region 138407
Tssr138408 16 38712297 to 38712314 17 + TSS region transcription start site region 138408
Cpgi8268 16 38712337 to 38713623 1286 CpG island CpG island 8268
Tssr138409 16 38712451 to 38712454 3 + TSS region transcription start site region 138409
Tssr141098 16 38712734 to 38712745 11 - TSS region transcription start site region 141098
Tssr141099 16 38712828 to 38712839 11 - TSS region transcription start site region 141099
Tssr141100 16 38712842 to 38712860 18 - TSS region transcription start site region 141100
Tssr141101 16 38712862 to 38712903 41 - TSS region transcription start site region 141101
Tssr141102 16 38712924 to 38712937 13 - TSS region transcription start site region 141102
Tssr141103 16 38712947 to 38712978 31 - TSS region transcription start site region 141103
Tssr138410 16 38712958 to 38712962 4 + TSS region transcription start site region 138410
Tssr4875 16 38712995 to 38712997 2 - TSS region transcription start site region 4875
Tssr141104 16 38713005 to 38713016 11 - TSS region transcription start site region 141104
Tssr141105 16 38713068 to 38713083 15 - TSS region transcription start site region 141105
Tssr141106 16 38713207 to 38713218 11 - TSS region transcription start site region 141106
Tssr141107 16 38713235 to 38713304 69 - TSS region transcription start site region 141107
Tssr141108 16 38713323 to 38713342 19 - TSS region transcription start site region 141108
Tssr141109 16 38713354 to 38713363 9 - TSS region transcription start site region 141109
Tssr141110 16 38713391 to 38713407 16 - TSS region transcription start site region 141110
Tssr141111 16 38713428 to 38713439 11 - TSS region transcription start site region 141111
Tssr141112 16 38713461 to 38713492 31 - TSS region transcription start site region 141112
Cpgi8269 16 38742045 to 38742907 862 CpG island CpG island 8269
Tssr138411 16 38742254 to 38742279 25 + TSS region transcription start site region 138411
B4galt4 16 38742264 to 38769049 26785 + protein coding gene UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4
Tssr138412 16 38742280 to 38742307 27 + TSS region transcription start site region 138412
Gm15575 16 38748729 to 38750309 1580 - pseudogene predicted gene 15575
Tssr138413 16 38761701 to 38761707 6 + TSS region transcription start site region 138413
Upk1b 16 38773182 to 38800203 27021 - protein coding gene uroplakin 1B