Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:38553971-38664311

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr138394 16 38555744 to 38555759 15 + TSS region transcription start site region 138394
Tssr138395 16 38558664 to 38558684 20 + TSS region transcription start site region 138395
Tssr138396 16 38558690 to 38558737 47 + TSS region transcription start site region 138396
Tmem39a 16 38558698 to 38592162 33464 + protein coding gene transmembrane protein 39a
Cpgi8265 16 38562644 to 38563333 689 CpG island CpG island 8265
Tssr141088 16 38562714 to 38562753 39 - TSS region transcription start site region 141088
Tssr138397 16 38562806 to 38562819 13 + TSS region transcription start site region 138397
Tssr138398 16 38562821 to 38562861 40 + TSS region transcription start site region 138398
Tssr138399 16 38562870 to 38562875 5 + TSS region transcription start site region 138399
Tssr138400 16 38562876 to 38562886 10 + TSS region transcription start site region 138400
Tssr138401 16 38562902 to 38562913 11 + TSS region transcription start site region 138401
Tssr138402 16 38564219 to 38564257 38 + TSS region transcription start site region 138402
Gm17103 16 38569323 to 38573300 3977 - antisense lncRNA gene predicted gene 17103
Tssr138403 16 38585358 to 38585375 17 + TSS region transcription start site region 138403
Tssr138404 16 38585380 to 38585391 11 + TSS region transcription start site region 138404
Arhgap31 16 38598343 to 38713035 114692 - protein coding gene Rho GTPase activating protein 31
Tssr141089 16 38600049 to 38600061 12 - TSS region transcription start site region 141089
Tssr141090 16 38602656 to 38602698 42 - TSS region transcription start site region 141090
Cpgi8266 16 38608971 to 38609311 340 CpG island CpG island 8266
D16Ium68 16 38612538 to 38612708 170 DNA segment DNA segment, Chr 16, Indiana University Medical 68
Gm36482 16 38614651 to 38653040 38389 + lncRNA gene predicted gene, 36482
Tssr141091 16 38622347 to 38622363 16 - TSS region transcription start site region 141091
Tssr141092 16 38622366 to 38622384 18 - TSS region transcription start site region 141092
Tssr141093 16 38636920 to 38636954 34 - TSS region transcription start site region 141093
Tssr138405 16 38651329 to 38651332 3 + TSS region transcription start site region 138405
Tssr138406 16 38661710 to 38661715 5 + TSS region transcription start site region 138406