Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:38120116-38320127

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gsk3b 16 38089001 to 38246080 157079 + protein coding gene glycogen synthase kinase 3 beta
Tssr138362 16 38128540 to 38128548 8 + TSS region transcription start site region 138362
Tssr138363 16 38131999 to 38132036 37 + TSS region transcription start site region 138363
Tssr138364 16 38132050 to 38132061 11 + TSS region transcription start site region 138364
Tssr138365 16 38143296 to 38143312 16 + TSS region transcription start site region 138365
Tssr138366 16 38143313 to 38143358 45 + TSS region transcription start site region 138366
Gm25617 16 38158008 to 38158139 131 + snoRNA gene predicted gene, 25617
Tssr138367 16 38177704 to 38177708 4 + TSS region transcription start site region 138367
Gm27931 16 38207463 to 38207591 128 - snoRNA gene predicted gene, 27931
Tssr138368 16 38220116 to 38220127 11 + TSS region transcription start site region 138368
Tssr138369 16 38240822 to 38240840 18 + TSS region transcription start site region 138369
Tssr138370 16 38244391 to 38244407 16 + TSS region transcription start site region 138370
Tssr138371 16 38244946 to 38244956 10 + TSS region transcription start site region 138371
Tssr138372 16 38244996 to 38245011 15 + TSS region transcription start site region 138372
Nr1i2 16 38248323 to 38294824 46501 - protein coding gene nuclear receptor subfamily 1, group I, member 2
Cpgi8253 16 38253794 to 38254370 576 CpG island CpG island 8253
Tssr141058 16 38294774 to 38294838 64 - TSS region transcription start site region 141058
Tssr141059 16 38294843 to 38294854 11 - TSS region transcription start site region 141059
Maats1 16 38297754 to 38341860 44106 - protein coding gene MYCBP-associated, testis expressed 1
Maats1os 16 38302616 to 38305020 2404 + antisense lncRNA gene MYCBP-associated, testis expressed 1, opposite strand
Cpgi8254 16 38304806 to 38304962 156 CpG island CpG island 8254
Cpgi8255 16 38306645 to 38306963 318 CpG island CpG island 8255