MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 16:37499169-37599449

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gtf2e1	16	37509795 to 37539773	29978	-	protein coding gene	general transcription factor II E, polypeptide 1 (alpha subunit)
Cpgi8247	16	37539305 to 37540182	877		CpG island	CpG island 8247
Tssr141040	16	37539693 to 37539710	17	-	TSS region	transcription start site region 141040
Tssr141041	16	37539727 to 37539730	3	-	TSS region	transcription start site region 141041
Tssr141042	16	37539737 to 37539751	14	-	TSS region	transcription start site region 141042
Tssr141043	16	37539752 to 37539780	28	-	TSS region	transcription start site region 141043
Tssr141044	16	37539781 to 37539796	15	-	TSS region	transcription start site region 141044
Tssr138308	16	37539883 to 37539918	35	+	TSS region	transcription start site region 138308
Rabl3	16	37539885 to 37572385	32500	+	protein coding gene	RAB, member RAS oncogene family-like 3
Gm49569	16	37549169 to 37549449	280	+	unclassified gene	predicted gene, 49569
Tssr138309	16	37580137 to 37580151	14	+	TSS region	transcription start site region 138309
Hgd	16	37580153 to 37632020	51867	+	protein coding gene	homogentisate 1, 2-dioxygenase
Tssr138310	16	37580212 to 37580224	12	+	TSS region	transcription start site region 138310
Tssr138311	16	37580228 to 37580258	30	+	TSS region	transcription start site region 138311
Tssr138312	16	37580274 to 37580289	15	+	TSS region	transcription start site region 138312
Gm46559	16	37591927 to 37596190	4263	-	antisense lncRNA gene	predicted gene, 46559
Tssr138313	16	37592081 to 37592085	4	+	TSS region	transcription start site region 138313