Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:37117752-37587991

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Stxbp5l 16 37114942 to 37384962 270020 - protein coding gene syntaxin binding protein 5-like
D16Mit226 16 37160319 to 37160426 107 DNA segment DNA Segment, Chr 16, Massachusetts Institute of Technology-226
Gm15665 16 37212916 to 37213735 819 - pseudogene predicted gene 15665
Gm49567 16 37352752 to 37352991 239 + pseudogene predicted gene, 49567
Cpgi8246 16 37384291 to 37385283 992 CpG island CpG island 8246
Tssr138307 16 37384495 to 37384500 5 + TSS region transcription start site region 138307
Tssr141038 16 37384915 to 37384931 16 - TSS region transcription start site region 141038
Tssr141039 16 37384940 to 37384978 38 - TSS region transcription start site region 141039
Gtf2e1 16 37509795 to 37539773 29978 - protein coding gene general transcription factor II E, polypeptide 1 (alpha subunit)
Cpgi8247 16 37539305 to 37540182 877 CpG island CpG island 8247
Tssr141040 16 37539693 to 37539710 17 - TSS region transcription start site region 141040
Tssr141041 16 37539727 to 37539730 3 - TSS region transcription start site region 141041
Tssr141042 16 37539737 to 37539751 14 - TSS region transcription start site region 141042
Tssr141043 16 37539752 to 37539780 28 - TSS region transcription start site region 141043
Tssr141044 16 37539781 to 37539796 15 - TSS region transcription start site region 141044
Tssr138308 16 37539883 to 37539918 35 + TSS region transcription start site region 138308
Rabl3 16 37539885 to 37572385 32500 + protein coding gene RAB, member RAS oncogene family-like 3
Gm49569 16 37549169 to 37549449 280 + unclassified gene predicted gene, 49569
Tssr138309 16 37580137 to 37580151 14 + TSS region transcription start site region 138309
Hgd 16 37580153 to 37632020 51867 + protein coding gene homogentisate 1, 2-dioxygenase
Tssr138310 16 37580212 to 37580224 12 + TSS region transcription start site region 138310
Tssr138311 16 37580228 to 37580258 30 + TSS region transcription start site region 138311
Tssr138312 16 37580274 to 37580289 15 + TSS region transcription start site region 138312