MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 16:36850227-36900242

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Eaf2	16	36792884 to 36874826	81942	-	protein coding gene	ELL associated factor 2
Iqcb1	16	36828385 to 36872721	44336	+	protein coding gene	IQ calmodulin-binding motif containing 1
2600002D14Rik	16	36862450 to 36862741	291	+	sense intronic lncRNA gene	RIKEN cDNA 2600002D14 gene
Tssr141023	16	36873428 to 36873435	7	-	TSS region	transcription start site region 141023
Tssr141024	16	36874806 to 36874862	56	-	TSS region	transcription start site region 141024
Cpgi8244	16	36874856 to 36875833	977		CpG island	CpG island 8244
Tssr138275	16	36875119 to 36875205	86	+	TSS region	transcription start site region 138275
Gm49599	16	36875140 to 36880234	5094	+	unclassified gene	predicted gene, 49599
Golgb1	16	36875173 to 36933085	57912	+	protein coding gene	golgi autoantigen, golgin subfamily b, macrogolgin 1
Tssr138276	16	36875227 to 36875242	15	+	TSS region	transcription start site region 138276
Tssr138277	16	36880058 to 36880073	15	+	TSS region	transcription start site region 138277
4930565N06Rik	16	36880519 to 36897189	16670	-	antisense lncRNA gene	RIKEN cDNA 4930565N06 gene
D16Mit99	16	36880869 to 36881011	142		DNA segment	DNA segment, Chr 16, Massachusetts Institute of Technology 99
Tssr138278	16	36887338 to 36887357	19	+	TSS region	transcription start site region 138278
Gm49600	16	36894394 to 36895683	1289	+	unclassified gene	predicted gene, 49600
Tssr141025	16	36895859 to 36895871	12	-	TSS region	transcription start site region 141025
Tssr141026	16	36897134 to 36897141	7	-	TSS region	transcription start site region 141026