Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:36517111-36927636

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87 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Casr 16 36493696 to 36562141 68445 - protein coding gene calcium-sensing receptor
Tssr140992 16 36532169 to 36532184 15 - TSS region transcription start site region 140992
Tssr140993 16 36532186 to 36532213 27 - TSS region transcription start site region 140993
Tssr140994 16 36532218 to 36532235 17 - TSS region transcription start site region 140994
Tssr140995 16 36532239 to 36532261 22 - TSS region transcription start site region 140995
Cpgi8238 16 36561343 to 36562026 683 CpG island CpG island 8238
Tssr140996 16 36561541 to 36561554 13 - TSS region transcription start site region 140996
Tssr140997 16 36561601 to 36561614 13 - TSS region transcription start site region 140997
Tssr140998 16 36561749 to 36561763 14 - TSS region transcription start site region 140998
Tssr140999 16 36561786 to 36561799 13 - TSS region transcription start site region 140999
Gm49662 16 36569145 to 36598497 29352 - lincRNA gene predicted gene, 49662
Gm49664 16 36577566 to 36577715 149 - pseudogene predicted gene, 49664
Tssr4868 16 36580173 to 36580184 11 + TSS region transcription start site region 4868
Gm49663 16 36580461 to 36580714 253 + pseudogene predicted gene, 49663
Tssr141000 16 36598351 to 36598373 22 - TSS region transcription start site region 141000
Cd86 16 36603869 to 36666081 62212 - protein coding gene CD86 antigen
Tssr141001 16 36610805 to 36610816 11 - TSS region transcription start site region 141001
Tssr141002 16 36610851 to 36610875 24 - TSS region transcription start site region 141002
Tssr141003 16 36611164 to 36611165 1 - TSS region transcription start site region 141003
Tssr141004 16 36618564 to 36618575 11 - TSS region transcription start site region 141004
Tssr141005 16 36621589 to 36621600 11 - TSS region transcription start site region 141005
Tssr141006 16 36626538 to 36626551 13 - TSS region transcription start site region 141006
Tssr138260 16 36633293 to 36633331 38 + TSS region transcription start site region 138260
D16Mit11 16 36633635 to 36633808 173 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 11
Cpgi8239 16 36635374 to 36635569 195 CpG island CpG island 8239
Tssr4869 16 36642722 to 36642731 9 - TSS region transcription start site region 4869
Tssr141007 16 36642742 to 36642753 11 - TSS region transcription start site region 141007
Tssr141008 16 36642787 to 36642806 19 - TSS region transcription start site region 141008
Tssr141009 16 36649005 to 36649012 7 - TSS region transcription start site region 141009
Tssr141010 16 36656748 to 36656757 9 - TSS region transcription start site region 141010
Tssr141011 16 36656818 to 36656829 11 - TSS region transcription start site region 141011
Tssr141012 16 36666044 to 36666055 11 - TSS region transcription start site region 141012
Tssr141013 16 36666067 to 36666086 19 - TSS region transcription start site region 141013
Gm41451 16 36686337 to 36688579 2242 - lncRNA gene predicted gene, 41451
Cpgi8240 16 36693737 to 36694373 636 CpG island CpG island 8240
Tssr138261 16 36693956 to 36693965 9 + TSS region transcription start site region 138261
Tssr138262 16 36693972 to 36694000 28 + TSS region transcription start site region 138262
Ildr1 16 36693978 to 36726804 32826 + protein coding gene immunoglobulin-like domain containing receptor 1
Tssr138263 16 36694024 to 36694037 13 + TSS region transcription start site region 138263
Tssr138264 16 36694043 to 36694062 19 + TSS region transcription start site region 138264
Tssr138265 16 36708230 to 36708239 9 + TSS region transcription start site region 138265
Tssr138266 16 36708289 to 36708304 15 + TSS region transcription start site region 138266
Tssr138267 16 36708316 to 36708338 22 + TSS region transcription start site region 138267
Tssr138268 16 36708667 to 36708676 9 + TSS region transcription start site region 138268
Cpgi8241 16 36709424 to 36709724 300 CpG island CpG island 8241
Tssr138269 16 36709783 to 36709797 14 + TSS region transcription start site region 138269
Tssr138270 16 36712035 to 36712044 9 + TSS region transcription start site region 138270
Tssr138271 16 36717724 to 36717756 32 + TSS region transcription start site region 138271
Cpgi8242 16 36722111 to 36722636 525 CpG island CpG island 8242
Tssr138272 16 36722540 to 36722568 28 + TSS region transcription start site region 138272
Gm8538 16 36735587 to 36737110 1523 + pseudogene predicted gene 8538
Slc15a2 16 36750177 to 36784962 34785 - protein coding gene solute carrier family 15 (H+/peptide transporter), member 2
Tssr141014 16 36770095 to 36770098 3 - TSS region transcription start site region 141014
Tssr141015 16 36778761 to 36778765 4 - TSS region transcription start site region 141015
Gm8425 16 36778834 to 36779602 768 + pseudogene predicted gene 8425
Tssr141016 16 36784699 to 36784728 29 - TSS region transcription start site region 141016
Tssr141017 16 36784746 to 36784758 12 - TSS region transcription start site region 141017
Tssr141018 16 36784784 to 36784825 41 - TSS region transcription start site region 141018
Tssr141019 16 36784826 to 36784848 22 - TSS region transcription start site region 141019
Tssr138273 16 36784892 to 36784923 31 + TSS region transcription start site region 138273
Tssr141020 16 36784932 to 36784971 39 - TSS region transcription start site region 141020
Tssr141021 16 36784974 to 36785001 27 - TSS region transcription start site region 141021
Gm22617 16 36789738 to 36789807 69 + miRNA gene predicted gene, 22617
Eaf2 16 36792884 to 36874826 81942 - protein coding gene ELL associated factor 2
Cpgi8243 16 36827794 to 36828778 984 CpG island CpG island 8243
Tssr141022 16 36828224 to 36828269 45 - TSS region transcription start site region 141022
Tssr138274 16 36828364 to 36828434 70 + TSS region transcription start site region 138274
Iqcb1 16 36828385 to 36872721 44336 + protein coding gene IQ calmodulin-binding motif containing 1
2600002D14Rik 16 36862450 to 36862741 291 + sense intronic lncRNA gene RIKEN cDNA 2600002D14 gene
Tssr141023 16 36873428 to 36873435 7 - TSS region transcription start site region 141023
Tssr141024 16 36874806 to 36874862 56 - TSS region transcription start site region 141024
Cpgi8244 16 36874856 to 36875833 977 CpG island CpG island 8244
Tssr138275 16 36875119 to 36875205 86 + TSS region transcription start site region 138275
Gm49599 16 36875140 to 36880234 5094 + unclassified gene predicted gene, 49599
Golgb1 16 36875173 to 36933085 57912 + protein coding gene golgi autoantigen, golgin subfamily b, macrogolgin 1
Tssr138276 16 36875227 to 36875242 15 + TSS region transcription start site region 138276
Tssr138277 16 36880058 to 36880073 15 + TSS region transcription start site region 138277
4930565N06Rik 16 36880519 to 36897189 16670 - antisense lncRNA gene RIKEN cDNA 4930565N06 gene
D16Mit99 16 36880869 to 36881011 142 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 99
Tssr138278 16 36887338 to 36887357 19 + TSS region transcription start site region 138278
Gm49600 16 36894394 to 36895683 1289 + unclassified gene predicted gene, 49600
Tssr141025 16 36895859 to 36895871 12 - TSS region transcription start site region 141025
Tssr141026 16 36897134 to 36897141 7 - TSS region transcription start site region 141026
Tssr138279 16 36913711 to 36913750 39 + TSS region transcription start site region 138279
Tssr138280 16 36914588 to 36914602 14 + TSS region transcription start site region 138280
Tssr138281 16 36916412 to 36916437 25 + TSS region transcription start site region 138281
Tssr138282 16 36924652 to 36924668 16 + TSS region transcription start site region 138282