MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 16:36212071-36342073

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Csta3	16	36210403 to 36217788	7385	+	protein coding gene	cystatin A family member 3
Gm24801	16	36217922 to 36218026	104	-	snRNA gene	predicted gene, 24801
Csta2	16	36221562 to 36257450	35888	+	protein coding gene	cystatin A family member 2
Gm10813	16	36235604 to 36235697	93	-	pseudogene	predicted gene 10813
D16Mit4	16	36240487 to 36240618	131		DNA segment	DNA segment, Chr 16, Massachusetts Institute of Technology 4
Gvhd6	16	36240487 to 45690785	9450298		QTL	graft-versus host disease 6
Tssr138257	16	36252872 to 36252877	5	+	TSS region	transcription start site region 138257
Gm24569	16	36257510 to 36257613	103	-	snRNA gene	predicted gene, 24569
Tssr4866	16	36277071 to 36277073	2	+	TSS region	transcription start site region 4866
Tssr138258	16	36277145 to 36277182	37	+	TSS region	transcription start site region 138258
Stfa1	16	36277148 to 36285371	8223	+	protein coding gene	stefin A1
Gm23306	16	36285433 to 36285537	104	-	snRNA gene	predicted gene, 23306
Cstdc3	16	36305357 to 36312717	7360	+	protein coding gene	cystatin domain containing 3
Tssr138259	16	36307992 to 36308005	13	+	TSS region	transcription start site region 138259
Gm25254	16	36312793 to 36312896	103	-	snRNA gene	predicted gene, 25254
Gm49647	16	36319142 to 36319605	463	+	pseudogene	predicted gene, 49647
Gm24437	16	36321481 to 36321584	103	+	snRNA gene	predicted gene, 24437
Cstdc6	16	36321665 to 36334332	12667	-	protein coding gene	cystatin domain containing 6
Tssr140983	16	36334330 to 36334347	17	-	TSS region	transcription start site region 140983