MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 16:36171562-36307450

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr138255	16	36184082 to 36184095	13	+	TSS region	transcription start site region 138255
Cstdc4	16	36184212 to 36188111	3899	+	protein coding gene	cystatin domain containing 4
Gm25024	16	36188174 to 36188277	103	-	snRNA gene	predicted gene, 25024
Gm6815	16	36194849 to 36198129	3280	-	pseudogene	predicted gene 6815
Tssr138256	16	36206395 to 36206398	3	+	TSS region	transcription start site region 138256
Gm10913	16	36209277 to 36209739	462	+	pseudogene	predicted pseudogene 10913
Csta3	16	36210403 to 36217788	7385	+	protein coding gene	cystatin A family member 3
Gm24801	16	36217922 to 36218026	104	-	snRNA gene	predicted gene, 24801
Csta2	16	36221562 to 36257450	35888	+	protein coding gene	cystatin A family member 2
Gm10813	16	36235604 to 36235697	93	-	pseudogene	predicted gene 10813
D16Mit4	16	36240487 to 36240618	131		DNA segment	DNA segment, Chr 16, Massachusetts Institute of Technology 4
Gvhd6	16	36240487 to 45690785	9450298		QTL	graft-versus host disease 6
Tssr138257	16	36252872 to 36252877	5	+	TSS region	transcription start site region 138257
Gm24569	16	36257510 to 36257613	103	-	snRNA gene	predicted gene, 24569
Tssr4866	16	36277071 to 36277073	2	+	TSS region	transcription start site region 4866
Tssr138258	16	36277145 to 36277182	37	+	TSS region	transcription start site region 138258
Stfa1	16	36277148 to 36285371	8223	+	protein coding gene	stefin A1
Gm23306	16	36285433 to 36285537	104	-	snRNA gene	predicted gene, 23306
Cstdc3	16	36305357 to 36312717	7360	+	protein coding gene	cystatin domain containing 3