Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:35655072-35885774

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81 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sema5b 16 35541154 to 35664261 123107 + protein coding gene sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B
Cpgi8227 16 35659549 to 35660734 1185 CpG island CpG island 8227
Tssr138221 16 35661110 to 35661112 2 + TSS region transcription start site region 138221
Mdq6 16 35694403 to 35694403 0 QTL mammary ductal QTL 6
Slc49a4 16 35694903 to 35769356 74453 - protein coding gene solute carrier family 49 member 4
Gm25967 16 35722087 to 35722233 146 - snoRNA gene predicted gene, 25967
Cpgi8228 16 35768697 to 35769636 939 CpG island CpG island 8228
Tssr140901 16 35769308 to 35769327 19 - TSS region transcription start site region 140901
Tssr140902 16 35769328 to 35769348 20 - TSS region transcription start site region 140902
Tssr140903 16 35769361 to 35769384 23 - TSS region transcription start site region 140903
Tssr140904 16 35769496 to 35769534 38 - TSS region transcription start site region 140904
Tssr140905 16 35769547 to 35769563 16 - TSS region transcription start site region 140905
Cpgi8229 16 35770072 to 35770774 702 CpG island CpG island 8229
Tssr140906 16 35770230 to 35770255 25 - TSS region transcription start site region 140906
Hspbap1 16 35770375 to 35828477 58102 + protein coding gene Hspb associated protein 1
Tssr138222 16 35770382 to 35770396 14 + TSS region transcription start site region 138222
Tssr138223 16 35770398 to 35770427 29 + TSS region transcription start site region 138223
Tssr140907 16 35771370 to 35771374 4 - TSS region transcription start site region 140907
Tssr138224 16 35775791 to 35775795 4 + TSS region transcription start site region 138224
C530005L23Rik 16 35785217 to 35787037 1820 unclassified gene RIKEN cDNA C530005L23 gene
Gm26838 16 35805947 to 35808946 2999 - antisense lncRNA gene predicted gene, 26838
Tssr138225 16 35809069 to 35809083 14 + TSS region transcription start site region 138225
Gm49728 16 35832030 to 35832261 231 - pseudogene predicted gene, 49728
Tssr140908 16 35832842 to 35832846 4 - TSS region transcription start site region 140908
Parp14 16 35832874 to 35871544 38670 - protein coding gene poly (ADP-ribose) polymerase family, member 14
Tssr140909 16 35837927 to 35837936 9 - TSS region transcription start site region 140909
Tssr140910 16 35841111 to 35841122 11 - TSS region transcription start site region 140910
Tssr140911 16 35841158 to 35841173 15 - TSS region transcription start site region 140911
Tssr140912 16 35841178 to 35841198 20 - TSS region transcription start site region 140912
Tssr140913 16 35841446 to 35841478 32 - TSS region transcription start site region 140913
Tssr140914 16 35841485 to 35841496 11 - TSS region transcription start site region 140914
Tssr140915 16 35841517 to 35841552 35 - TSS region transcription start site region 140915
Tssr140916 16 35841556 to 35841567 11 - TSS region transcription start site region 140916
Tssr140917 16 35841607 to 35841638 31 - TSS region transcription start site region 140917
Tssr140918 16 35843766 to 35843793 27 - TSS region transcription start site region 140918
Tssr140919 16 35843813 to 35843829 16 - TSS region transcription start site region 140919
Tssr140920 16 35843833 to 35843845 12 - TSS region transcription start site region 140920
Tssr140921 16 35843849 to 35843861 12 - TSS region transcription start site region 140921
Tssr140922 16 35843956 to 35843971 15 - TSS region transcription start site region 140922
Tssr140923 16 35843976 to 35843988 12 - TSS region transcription start site region 140923
Tssr140924 16 35843991 to 35844014 23 - TSS region transcription start site region 140924
Tssr140925 16 35844049 to 35844064 15 - TSS region transcription start site region 140925
Tssr140926 16 35844235 to 35844244 9 - TSS region transcription start site region 140926
Tssr140927 16 35844325 to 35844338 13 - TSS region transcription start site region 140927
Tssr140928 16 35844382 to 35844397 15 - TSS region transcription start site region 140928
Tssr140929 16 35845356 to 35845367 11 - TSS region transcription start site region 140929
Tssr140930 16 35845395 to 35845412 17 - TSS region transcription start site region 140930
Tssr140931 16 35848021 to 35848033 12 - TSS region transcription start site region 140931
Tssr140932 16 35852763 to 35852777 14 - TSS region transcription start site region 140932
Tssr140933 16 35853594 to 35853609 15 - TSS region transcription start site region 140933
Tssr140934 16 35853730 to 35853765 35 - TSS region transcription start site region 140934
Tssr140935 16 35854569 to 35854581 12 - TSS region transcription start site region 140935
Tssr140936 16 35855002 to 35855048 46 - TSS region transcription start site region 140936
Tssr140937 16 35856212 to 35856238 26 - TSS region transcription start site region 140937
Tssr140938 16 35856669 to 35856687 18 - TSS region transcription start site region 140938
Tssr138226 16 35857142 to 35857220 78 + TSS region transcription start site region 138226
Tssr140939 16 35857188 to 35857220 32 - TSS region transcription start site region 140939
Tssr140940 16 35857324 to 35857342 18 - TSS region transcription start site region 140940
Tssr140941 16 35857480 to 35857520 40 - TSS region transcription start site region 140941
Tssr140942 16 35857574 to 35857592 18 - TSS region transcription start site region 140942
Tssr140943 16 35857661 to 35857701 40 - TSS region transcription start site region 140943
Tssr140944 16 35857725 to 35857766 41 - TSS region transcription start site region 140944
Tssr140945 16 35857770 to 35857794 24 - TSS region transcription start site region 140945
Tssr140946 16 35857808 to 35857823 15 - TSS region transcription start site region 140946
Tssr140947 16 35857828 to 35857850 22 - TSS region transcription start site region 140947
Tssr140948 16 35857999 to 35858011 12 - TSS region transcription start site region 140948
Tssr140949 16 35858061 to 35858073 12 - TSS region transcription start site region 140949
Tssr140950 16 35858364 to 35858375 11 - TSS region transcription start site region 140950
Tssr140951 16 35858418 to 35858457 39 - TSS region transcription start site region 140951
Tssr140952 16 35858658 to 35858670 12 - TSS region transcription start site region 140952
Tssr140953 16 35859068 to 35859100 32 - TSS region transcription start site region 140953
Tssr140954 16 35860477 to 35860505 28 - TSS region transcription start site region 140954
Tssr140955 16 35866177 to 35866228 51 - TSS region transcription start site region 140955
Gm49730 16 35866179 to 35867951 1772 - unclassified gene predicted gene, 49730
Tssr140956 16 35866257 to 35866299 42 - TSS region transcription start site region 140956
Tssr140957 16 35869181 to 35869194 13 - TSS region transcription start site region 140957
Cpgi8230 16 35870899 to 35871396 497 CpG island CpG island 8230
Tssr140958 16 35871372 to 35871388 16 - TSS region transcription start site region 140958
Tssr138227 16 35871457 to 35871482 25 + TSS region transcription start site region 138227
Tssr138228 16 35871616 to 35871631 15 + TSS region transcription start site region 138228
Tssr140959 16 35872574 to 35872609 35 - TSS region transcription start site region 140959