MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 16:35400108-35581072

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Pdia5	16	35397312 to 35490873	93561	-	protein coding gene	protein disulfide isomerase associated 5
Tssr140895	16	35413180 to 35413192	12	-	TSS region	transcription start site region 140895
Gm25548	16	35440254 to 35440363	109	-	miRNA gene	predicted gene, 25548
Tssr138216	16	35451040 to 35451043	3	+	TSS region	transcription start site region 138216
Cpgi8223	16	35490108 to 35491072	964		CpG island	CpG island 8223
Tssr140896	16	35490779 to 35490792	13	-	TSS region	transcription start site region 140896
Tssr140897	16	35490802 to 35490858	56	-	TSS region	transcription start site region 140897
Tssr140898	16	35490873 to 35490891	18	-	TSS region	transcription start site region 140898
Gm18105	16	35501310 to 35502575	1265	+	pseudogene	predicted gene, 18105
1600019K03Rik	16	35503170 to 35509419	6249	-	lincRNA gene	RIKEN cDNA 1600019K03 gene
Cpgi8224	16	35540989 to 35542968	1979		CpG island	CpG island 8224
Sema5b	16	35541154 to 35664261	123107	+	protein coding gene	sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B
Tssr138217	16	35541275 to 35541339	64	+	TSS region	transcription start site region 138217
Tssr4863	16	35568161 to 35568164	3	+	TSS region	transcription start site region 4863
Gm5963	16	35573321 to 35573556	235	-	pseudogene	predicted pseudogene 5963
Tssr140899	16	35573593 to 35573604	11	-	TSS region	transcription start site region 140899
Tssr138218	16	35580835 to 35580839	4	+	TSS region	transcription start site region 138218