Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:34344948-34954957

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57 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Kalrn 16 33969073 to 34573291 604218 - protein coding gene kalirin, RhoGEF kinase
Cpgi8216 16 34356916 to 34357193 277 CpG island CpG island 8216
Cet1 16 34396802 to 34397498 696 unclassified gene cerebellum expressed transcript 1
Tssr140876 16 34514044 to 34514056 12 - TSS region transcription start site region 140876
Tssr140877 16 34514063 to 34514079 16 - TSS region transcription start site region 140877
Tssr140878 16 34514084 to 34514128 44 - TSS region transcription start site region 140878
Tssr140879 16 34514175 to 34514184 9 - TSS region transcription start site region 140879
Tssr140880 16 34514205 to 34514211 6 - TSS region transcription start site region 140880
Tssr140881 16 34518188 to 34518200 12 - TSS region transcription start site region 140881
Tssr140882 16 34542162 to 34542166 4 - TSS region transcription start site region 140882
Tssr140883 16 34566507 to 34566510 3 - TSS region transcription start site region 140883
Cpgi8217 16 34572186 to 34574328 2142 CpG island CpG island 8217
Tssr140884 16 34573526 to 34573554 28 - TSS region transcription start site region 140884
Tssr140885 16 34573921 to 34573936 15 - TSS region transcription start site region 140885
Tssr138148 16 34649893 to 34649917 24 + TSS region transcription start site region 138148
Tssr138149 16 34649920 to 34649944 24 + TSS region transcription start site region 138149
Ropn1 16 34649921 to 34678618 28697 + protein coding gene ropporin, rhophilin associated protein 1
Tssr138150 16 34649948 to 34649957 9 + TSS region transcription start site region 138150
Tssr138151 16 34651202 to 34651219 17 + TSS region transcription start site region 138151
Tssr138152 16 34651226 to 34651235 9 + TSS region transcription start site region 138152
Tssr138153 16 34660752 to 34660758 6 + TSS region transcription start site region 138153
Gm35150 16 34683046 to 34690706 7660 - lncRNA gene predicted gene, 35150
Tssr138154 16 34690548 to 34690559 11 + TSS region transcription start site region 138154
Cpgi8218 16 34690551 to 34691043 492 CpG island CpG island 8218
Ccdc14 16 34690616 to 34725202 34586 + protein coding gene coiled-coil domain containing 14
Tssr138155 16 34690703 to 34690720 17 + TSS region transcription start site region 138155
Tssr138156 16 34690748 to 34690774 26 + TSS region transcription start site region 138156
Cpgi8219 16 34744906 to 34745657 751 CpG island CpG island 8219
Tssr138157 16 34745201 to 34745216 15 + TSS region transcription start site region 138157
Mylk 16 34745210 to 35002420 257210 + protein coding gene myosin, light polypeptide kinase
Tssr138158 16 34784779 to 34784793 14 + TSS region transcription start site region 138158
Tssr138159 16 34784876 to 34784886 10 + TSS region transcription start site region 138159
Tssr138160 16 34784896 to 34784909 13 + TSS region transcription start site region 138160
Tssr138161 16 34784917 to 34784935 18 + TSS region transcription start site region 138161
Tssr138162 16 34807199 to 34807217 18 + TSS region transcription start site region 138162
Tssr138163 16 34807225 to 34807309 84 + TSS region transcription start site region 138163
Tssr138164 16 34807321 to 34807344 23 + TSS region transcription start site region 138164
Tssr138165 16 34819607 to 34819608 1 + TSS region transcription start site region 138165
Tssr138166 16 34883432 to 34883441 9 + TSS region transcription start site region 138166
Tssr138167 16 34883526 to 34883545 19 + TSS region transcription start site region 138167
Tssr138168 16 34887611 to 34887615 4 + TSS region transcription start site region 138168
Tssr138169 16 34900231 to 34900248 17 + TSS region transcription start site region 138169
Tssr4859 16 34921063 to 34921075 12 + TSS region transcription start site region 4859
Tssr138170 16 34921400 to 34921405 5 + TSS region transcription start site region 138170
Tssr138171 16 34921480 to 34921491 11 + TSS region transcription start site region 138171
Tssr138172 16 34921504 to 34921517 13 + TSS region transcription start site region 138172
Tssr138173 16 34921518 to 34921594 76 + TSS region transcription start site region 138173
Tssr138174 16 34921614 to 34921636 22 + TSS region transcription start site region 138174
Tssr138175 16 34921838 to 34921847 9 + TSS region transcription start site region 138175
Tssr138176 16 34922094 to 34922103 9 + TSS region transcription start site region 138176
Tssr138177 16 34926188 to 34926194 6 + TSS region transcription start site region 138177
Tssr138178 16 34929278 to 34929281 3 + TSS region transcription start site region 138178
Tssr138179 16 34930333 to 34930350 17 + TSS region transcription start site region 138179
1700119H24Rik 16 34935855 to 34939329 3474 - antisense lncRNA gene RIKEN cDNA 1700119H24 gene
E130310I04Rik 16 34943175 to 34958994 15819 - antisense lncRNA gene RIKEN cDNA E130310I04 gene
Tssr140886 16 34943269 to 34943287 18 - TSS region transcription start site region 140886
Tssr138180 16 34952539 to 34952561 22 + TSS region transcription start site region 138180