Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:33885034-34085036

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Itgb5 16 33829665 to 33949338 119673 + protein coding gene integrin beta 5
Tssr138139 16 33885050 to 33885093 43 + TSS region transcription start site region 138139
Tssr138140 16 33885332 to 33885336 4 + TSS region transcription start site region 138140
Tssr138141 16 33887359 to 33887363 4 + TSS region transcription start site region 138141
Tssr138142 16 33891936 to 33891964 28 + TSS region transcription start site region 138142
Tssr138143 16 33891965 to 33891990 25 + TSS region transcription start site region 138143
Umps 16 33954784 to 33967003 12219 - protein coding gene uridine monophosphate synthetase
Tssr4856 16 33959838 to 33959842 4 + TSS region transcription start site region 4856
Gm15829 16 33966239 to 33967312 1073 + antisense lncRNA gene predicted gene 15829
Cpgi8213 16 33966596 to 33967096 500 CpG island CpG island 8213
Tssr140851 16 33966995 to 33967010 15 - TSS region transcription start site region 140851
Tssr140852 16 33967032 to 33967043 11 - TSS region transcription start site region 140852
Kalrn 16 33969073 to 34573291 604218 - protein coding gene kalirin, RhoGEF kinase
Tssr138144 16 33985034 to 33985036 2 + TSS region transcription start site region 138144
Gm46566 16 34000644 to 34006637 5993 - lncRNA gene predicted gene, 46566
Gm49594 16 34006843 to 34007457 614 - pseudogene predicted gene, 49594
Tssr140853 16 34013440 to 34013444 4 - TSS region transcription start site region 140853
Tssr4857 16 34034451 to 34034457 6 - TSS region transcription start site region 4857
Tssr140854 16 34040284 to 34040296 12 - TSS region transcription start site region 140854
Tssr140855 16 34081798 to 34081821 23 - TSS region transcription start site region 140855
Tssr140856 16 34081893 to 34081938 45 - TSS region transcription start site region 140856