Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:33806596-34127096

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48 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Muc13 16 33794037 to 33819929 25892 + protein coding gene mucin 13, epithelial transmembrane
Tssr4854 16 33807859 to 33807885 26 + TSS region transcription start site region 4854
Tssr138124 16 33818887 to 33818899 12 + TSS region transcription start site region 138124
Tssr140850 16 33818932 to 33818947 15 - TSS region transcription start site region 140850
Tssr4855 16 33819127 to 33819158 31 + TSS region transcription start site region 4855
Tssr138125 16 33819177 to 33819189 12 + TSS region transcription start site region 138125
Tssr138126 16 33819489 to 33819517 28 + TSS region transcription start site region 138126
Tssr138127 16 33819534 to 33819568 34 + TSS region transcription start site region 138127
Tssr138128 16 33819578 to 33819587 9 + TSS region transcription start site region 138128
Tssr138129 16 33819677 to 33819694 17 + TSS region transcription start site region 138129
Tssr138130 16 33819707 to 33819719 12 + TSS region transcription start site region 138130
Gm34967 16 33824045 to 33824280 235 - pseudogene predicted gene, 34967
Cpgi8212 16 33829188 to 33830652 1464 CpG island CpG island 8212
Tssr138131 16 33829624 to 33829667 43 + TSS region transcription start site region 138131
Itgb5 16 33829665 to 33949338 119673 + protein coding gene integrin beta 5
Tssr138132 16 33829681 to 33829706 25 + TSS region transcription start site region 138132
Tssr138133 16 33829720 to 33829768 48 + TSS region transcription start site region 138133
Tssr138134 16 33829775 to 33829780 5 + TSS region transcription start site region 138134
Tssr138135 16 33829790 to 33829802 12 + TSS region transcription start site region 138135
Tssr138136 16 33829913 to 33829953 40 + TSS region transcription start site region 138136
Tssr138137 16 33863622 to 33863653 31 + TSS region transcription start site region 138137
Tssr138138 16 33883634 to 33883681 47 + TSS region transcription start site region 138138
Tssr138139 16 33885050 to 33885093 43 + TSS region transcription start site region 138139
Tssr138140 16 33885332 to 33885336 4 + TSS region transcription start site region 138140
Tssr138141 16 33887359 to 33887363 4 + TSS region transcription start site region 138141
Tssr138142 16 33891936 to 33891964 28 + TSS region transcription start site region 138142
Tssr138143 16 33891965 to 33891990 25 + TSS region transcription start site region 138143
Umps 16 33954784 to 33967003 12219 - protein coding gene uridine monophosphate synthetase
Tssr4856 16 33959838 to 33959842 4 + TSS region transcription start site region 4856
Gm15829 16 33966239 to 33967312 1073 + antisense lncRNA gene predicted gene 15829
Cpgi8213 16 33966596 to 33967096 500 CpG island CpG island 8213
Tssr140851 16 33966995 to 33967010 15 - TSS region transcription start site region 140851
Tssr140852 16 33967032 to 33967043 11 - TSS region transcription start site region 140852
Kalrn 16 33969073 to 34573291 604218 - protein coding gene kalirin, RhoGEF kinase
Tssr138144 16 33985034 to 33985036 2 + TSS region transcription start site region 138144
Gm46566 16 34000644 to 34006637 5993 - lncRNA gene predicted gene, 46566
Gm49594 16 34006843 to 34007457 614 - pseudogene predicted gene, 49594
Tssr140853 16 34013440 to 34013444 4 - TSS region transcription start site region 140853
Tssr4857 16 34034451 to 34034457 6 - TSS region transcription start site region 4857
Tssr140854 16 34040284 to 34040296 12 - TSS region transcription start site region 140854
Tssr140855 16 34081798 to 34081821 23 - TSS region transcription start site region 140855
Tssr140856 16 34081893 to 34081938 45 - TSS region transcription start site region 140856
Cpgi8214 16 34094258 to 34094543 285 CpG island CpG island 8214
Cpgi8215 16 34095519 to 34096137 618 CpG island CpG island 8215
Tssr140857 16 34095983 to 34096060 77 - TSS region transcription start site region 140857
Gm41448 16 34119812 to 34139809 19997 + lncRNA gene predicted gene, 41448
Tssr138145 16 34120081 to 34120093 12 + TSS region transcription start site region 138145
Tssr138146 16 34120129 to 34120178 49 + TSS region transcription start site region 138146