Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:33772359-34002363

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54 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm15657 16 33770430 to 33796874 26444 - antisense lncRNA gene predicted gene 15657
Gm15658 16 33785697 to 33787768 2071 - lncRNA gene predicted gene 15658
Tssr140846 16 33786968 to 33787019 51 - TSS region transcription start site region 140846
Tssr140847 16 33787104 to 33787132 28 - TSS region transcription start site region 140847
Tssr140848 16 33787166 to 33787176 10 - TSS region transcription start site region 140848
Tssr138113 16 33793978 to 33793985 7 + TSS region transcription start site region 138113
Tssr138114 16 33794008 to 33794030 22 + TSS region transcription start site region 138114
Muc13 16 33794037 to 33819929 25892 + protein coding gene mucin 13, epithelial transmembrane
Tssr138115 16 33794047 to 33794064 17 + TSS region transcription start site region 138115
Tssr138116 16 33794067 to 33794088 21 + TSS region transcription start site region 138116
Tssr138117 16 33794113 to 33794122 9 + TSS region transcription start site region 138117
Tssr4853 16 33794124 to 33794133 9 + TSS region transcription start site region 4853
Tssr138118 16 33794135 to 33794161 26 + TSS region transcription start site region 138118
Tssr138119 16 33794345 to 33794356 11 + TSS region transcription start site region 138119
Tssr138120 16 33794481 to 33794496 15 + TSS region transcription start site region 138120
Tssr140849 16 33796036 to 33796060 24 - TSS region transcription start site region 140849
Tssr138121 16 33798967 to 33798989 22 + TSS region transcription start site region 138121
Tssr138122 16 33799493 to 33799508 15 + TSS region transcription start site region 138122
Tssr138123 16 33806024 to 33806041 17 + TSS region transcription start site region 138123
Tssr4854 16 33807859 to 33807885 26 + TSS region transcription start site region 4854
Tssr138124 16 33818887 to 33818899 12 + TSS region transcription start site region 138124
Tssr140850 16 33818932 to 33818947 15 - TSS region transcription start site region 140850
Tssr4855 16 33819127 to 33819158 31 + TSS region transcription start site region 4855
Tssr138125 16 33819177 to 33819189 12 + TSS region transcription start site region 138125
Tssr138126 16 33819489 to 33819517 28 + TSS region transcription start site region 138126
Tssr138127 16 33819534 to 33819568 34 + TSS region transcription start site region 138127
Tssr138128 16 33819578 to 33819587 9 + TSS region transcription start site region 138128
Tssr138129 16 33819677 to 33819694 17 + TSS region transcription start site region 138129
Tssr138130 16 33819707 to 33819719 12 + TSS region transcription start site region 138130
Gm34967 16 33824045 to 33824280 235 - pseudogene predicted gene, 34967
Cpgi8212 16 33829188 to 33830652 1464 CpG island CpG island 8212
Tssr138131 16 33829624 to 33829667 43 + TSS region transcription start site region 138131
Itgb5 16 33829665 to 33949338 119673 + protein coding gene integrin beta 5
Tssr138132 16 33829681 to 33829706 25 + TSS region transcription start site region 138132
Tssr138133 16 33829720 to 33829768 48 + TSS region transcription start site region 138133
Tssr138134 16 33829775 to 33829780 5 + TSS region transcription start site region 138134
Tssr138135 16 33829790 to 33829802 12 + TSS region transcription start site region 138135
Tssr138136 16 33829913 to 33829953 40 + TSS region transcription start site region 138136
Tssr138137 16 33863622 to 33863653 31 + TSS region transcription start site region 138137
Tssr138138 16 33883634 to 33883681 47 + TSS region transcription start site region 138138
Tssr138139 16 33885050 to 33885093 43 + TSS region transcription start site region 138139
Tssr138140 16 33885332 to 33885336 4 + TSS region transcription start site region 138140
Tssr138141 16 33887359 to 33887363 4 + TSS region transcription start site region 138141
Tssr138142 16 33891936 to 33891964 28 + TSS region transcription start site region 138142
Tssr138143 16 33891965 to 33891990 25 + TSS region transcription start site region 138143
Umps 16 33954784 to 33967003 12219 - protein coding gene uridine monophosphate synthetase
Tssr4856 16 33959838 to 33959842 4 + TSS region transcription start site region 4856
Gm15829 16 33966239 to 33967312 1073 + antisense lncRNA gene predicted gene 15829
Cpgi8213 16 33966596 to 33967096 500 CpG island CpG island 8213
Tssr140851 16 33966995 to 33967010 15 - TSS region transcription start site region 140851
Tssr140852 16 33967032 to 33967043 11 - TSS region transcription start site region 140852
Kalrn 16 33969073 to 34573291 604218 - protein coding gene kalirin, RhoGEF kinase
Tssr138144 16 33985034 to 33985036 2 + TSS region transcription start site region 138144
Gm46566 16 34000644 to 34006637 5993 - lncRNA gene predicted gene, 46566