Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:33582945-34942972

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164 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc12a8 16 33517333 to 33664135 146802 + protein coding gene solute carrier family 12 (potassium/chloride transporters), member 8
Tssr138098 16 33594391 to 33594400 9 + TSS region transcription start site region 138098
D16Mit111 16 33664953 to 33665090 137 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 111
Cpgi8209 16 33684186 to 33685090 904 CpG island CpG island 8209
Heg1 16 33684430 to 33771576 87146 + protein coding gene heart development protein with EGF-like domains 1
Tssr138099 16 33684444 to 33684456 12 + TSS region transcription start site region 138099
Tssr138100 16 33684460 to 33684472 12 + TSS region transcription start site region 138100
Tssr138101 16 33684480 to 33684498 18 + TSS region transcription start site region 138101
Tssr138102 16 33684504 to 33684532 28 + TSS region transcription start site region 138102
Tssr138103 16 33684538 to 33684554 16 + TSS region transcription start site region 138103
Tssr138104 16 33700710 to 33700713 3 + TSS region transcription start site region 138104
Tssr138105 16 33720837 to 33720851 14 + TSS region transcription start site region 138105
Tssr138106 16 33725481 to 33725485 4 + TSS region transcription start site region 138106
Tssr4850 16 33725586 to 33725609 23 + TSS region transcription start site region 4850
Tssr138107 16 33726395 to 33726419 24 + TSS region transcription start site region 138107
Tssr138108 16 33726671 to 33726688 17 + TSS region transcription start site region 138108
Tssr138109 16 33726739 to 33726779 40 + TSS region transcription start site region 138109
Tssr4851 16 33746994 to 33747014 20 + TSS region transcription start site region 4851
Cpgi8210 16 33751692 to 33751914 222 CpG island CpG island 8210
Tssr138110 16 33752632 to 33752637 5 + TSS region transcription start site region 138110
Tssr4852 16 33753330 to 33753336 6 + TSS region transcription start site region 4852
Tssr138111 16 33754775 to 33754779 4 + TSS region transcription start site region 138111
Tssr138112 16 33755571 to 33755589 18 + TSS region transcription start site region 138112
D16Mit10 16 33757460 to 33757668 208 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 10
Cpgi8211 16 33766773 to 33767122 349 CpG island CpG island 8211
Gm15657 16 33770430 to 33796874 26444 - antisense lncRNA gene predicted gene 15657
Gm15658 16 33785697 to 33787768 2071 - lncRNA gene predicted gene 15658
Tssr140846 16 33786968 to 33787019 51 - TSS region transcription start site region 140846
Tssr140847 16 33787104 to 33787132 28 - TSS region transcription start site region 140847
Tssr140848 16 33787166 to 33787176 10 - TSS region transcription start site region 140848
Tssr138113 16 33793978 to 33793985 7 + TSS region transcription start site region 138113
Tssr138114 16 33794008 to 33794030 22 + TSS region transcription start site region 138114
Muc13 16 33794037 to 33819929 25892 + protein coding gene mucin 13, epithelial transmembrane
Tssr138115 16 33794047 to 33794064 17 + TSS region transcription start site region 138115
Tssr138116 16 33794067 to 33794088 21 + TSS region transcription start site region 138116
Tssr138117 16 33794113 to 33794122 9 + TSS region transcription start site region 138117
Tssr4853 16 33794124 to 33794133 9 + TSS region transcription start site region 4853
Tssr138118 16 33794135 to 33794161 26 + TSS region transcription start site region 138118
Tssr138119 16 33794345 to 33794356 11 + TSS region transcription start site region 138119
Tssr138120 16 33794481 to 33794496 15 + TSS region transcription start site region 138120
Tssr140849 16 33796036 to 33796060 24 - TSS region transcription start site region 140849
Tssr138121 16 33798967 to 33798989 22 + TSS region transcription start site region 138121
Tssr138122 16 33799493 to 33799508 15 + TSS region transcription start site region 138122
Tssr138123 16 33806024 to 33806041 17 + TSS region transcription start site region 138123
Tssr4854 16 33807859 to 33807885 26 + TSS region transcription start site region 4854
Tssr138124 16 33818887 to 33818899 12 + TSS region transcription start site region 138124
Tssr140850 16 33818932 to 33818947 15 - TSS region transcription start site region 140850
Tssr4855 16 33819127 to 33819158 31 + TSS region transcription start site region 4855
Tssr138125 16 33819177 to 33819189 12 + TSS region transcription start site region 138125
Tssr138126 16 33819489 to 33819517 28 + TSS region transcription start site region 138126
Tssr138127 16 33819534 to 33819568 34 + TSS region transcription start site region 138127
Tssr138128 16 33819578 to 33819587 9 + TSS region transcription start site region 138128
Tssr138129 16 33819677 to 33819694 17 + TSS region transcription start site region 138129
Tssr138130 16 33819707 to 33819719 12 + TSS region transcription start site region 138130
Gm34967 16 33824045 to 33824280 235 - pseudogene predicted gene, 34967
Cpgi8212 16 33829188 to 33830652 1464 CpG island CpG island 8212
Tssr138131 16 33829624 to 33829667 43 + TSS region transcription start site region 138131
Itgb5 16 33829665 to 33949338 119673 + protein coding gene integrin beta 5
Tssr138132 16 33829681 to 33829706 25 + TSS region transcription start site region 138132
Tssr138133 16 33829720 to 33829768 48 + TSS region transcription start site region 138133
Tssr138134 16 33829775 to 33829780 5 + TSS region transcription start site region 138134
Tssr138135 16 33829790 to 33829802 12 + TSS region transcription start site region 138135
Tssr138136 16 33829913 to 33829953 40 + TSS region transcription start site region 138136
Tssr138137 16 33863622 to 33863653 31 + TSS region transcription start site region 138137
Tssr138138 16 33883634 to 33883681 47 + TSS region transcription start site region 138138
Tssr138139 16 33885050 to 33885093 43 + TSS region transcription start site region 138139
Tssr138140 16 33885332 to 33885336 4 + TSS region transcription start site region 138140
Tssr138141 16 33887359 to 33887363 4 + TSS region transcription start site region 138141
Tssr138142 16 33891936 to 33891964 28 + TSS region transcription start site region 138142
Tssr138143 16 33891965 to 33891990 25 + TSS region transcription start site region 138143
Umps 16 33954784 to 33967003 12219 - protein coding gene uridine monophosphate synthetase
Tssr4856 16 33959838 to 33959842 4 + TSS region transcription start site region 4856
Gm15829 16 33966239 to 33967312 1073 + antisense lncRNA gene predicted gene 15829
Cpgi8213 16 33966596 to 33967096 500 CpG island CpG island 8213
Tssr140851 16 33966995 to 33967010 15 - TSS region transcription start site region 140851
Tssr140852 16 33967032 to 33967043 11 - TSS region transcription start site region 140852
Kalrn 16 33969073 to 34573291 604218 - protein coding gene kalirin, RhoGEF kinase
Tssr138144 16 33985034 to 33985036 2 + TSS region transcription start site region 138144
Gm46566 16 34000644 to 34006637 5993 - lncRNA gene predicted gene, 46566
Gm49594 16 34006843 to 34007457 614 - pseudogene predicted gene, 49594
Tssr140853 16 34013440 to 34013444 4 - TSS region transcription start site region 140853
Tssr4857 16 34034451 to 34034457 6 - TSS region transcription start site region 4857
Tssr140854 16 34040284 to 34040296 12 - TSS region transcription start site region 140854
Tssr140855 16 34081798 to 34081821 23 - TSS region transcription start site region 140855
Tssr140856 16 34081893 to 34081938 45 - TSS region transcription start site region 140856
Cpgi8214 16 34094258 to 34094543 285 CpG island CpG island 8214
Cpgi8215 16 34095519 to 34096137 618 CpG island CpG island 8215
Tssr140857 16 34095983 to 34096060 77 - TSS region transcription start site region 140857
Gm41448 16 34119812 to 34139809 19997 + lncRNA gene predicted gene, 41448
Tssr138145 16 34120081 to 34120093 12 + TSS region transcription start site region 138145
Tssr138146 16 34120129 to 34120178 49 + TSS region transcription start site region 138146
Tssr138147 16 34175796 to 34175806 10 + TSS region transcription start site region 138147
Tssr140858 16 34175812 to 34175830 18 - TSS region transcription start site region 140858
Tssr140859 16 34191783 to 34191787 4 - TSS region transcription start site region 140859
Tssr140860 16 34199427 to 34199458 31 - TSS region transcription start site region 140860
Tssr140861 16 34204831 to 34204833 2 - TSS region transcription start site region 140861
Tssr140862 16 34223189 to 34223198 9 - TSS region transcription start site region 140862
Tssr140863 16 34239164 to 34239172 8 - TSS region transcription start site region 140863
Tssr140864 16 34255429 to 34255440 11 - TSS region transcription start site region 140864
Tssr140865 16 34255662 to 34255668 6 - TSS region transcription start site region 140865
Tssr140866 16 34262830 to 34262841 11 - TSS region transcription start site region 140866
Tssr140867 16 34262878 to 34262888 10 - TSS region transcription start site region 140867
Tssr140868 16 34262894 to 34262920 26 - TSS region transcription start site region 140868
Tssr4858 16 34262935 to 34262942 7 - TSS region transcription start site region 4858
Tssr140869 16 34262945 to 34262972 27 - TSS region transcription start site region 140869
Tssr140870 16 34263002 to 34263013 11 - TSS region transcription start site region 140870
Tssr140871 16 34263026 to 34263038 12 - TSS region transcription start site region 140871
Tssr140872 16 34263049 to 34263065 16 - TSS region transcription start site region 140872
Tssr140873 16 34263076 to 34263099 23 - TSS region transcription start site region 140873
Tssr140874 16 34263179 to 34263208 29 - TSS region transcription start site region 140874
Tssr140875 16 34263211 to 34263249 38 - TSS region transcription start site region 140875
Cpgi8216 16 34356916 to 34357193 277 CpG island CpG island 8216
Cet1 16 34396802 to 34397498 696 unclassified gene cerebellum expressed transcript 1
Tssr140876 16 34514044 to 34514056 12 - TSS region transcription start site region 140876
Tssr140877 16 34514063 to 34514079 16 - TSS region transcription start site region 140877
Tssr140878 16 34514084 to 34514128 44 - TSS region transcription start site region 140878
Tssr140879 16 34514175 to 34514184 9 - TSS region transcription start site region 140879
Tssr140880 16 34514205 to 34514211 6 - TSS region transcription start site region 140880
Tssr140881 16 34518188 to 34518200 12 - TSS region transcription start site region 140881
Tssr140882 16 34542162 to 34542166 4 - TSS region transcription start site region 140882
Tssr140883 16 34566507 to 34566510 3 - TSS region transcription start site region 140883
Cpgi8217 16 34572186 to 34574328 2142 CpG island CpG island 8217
Tssr140884 16 34573526 to 34573554 28 - TSS region transcription start site region 140884
Tssr140885 16 34573921 to 34573936 15 - TSS region transcription start site region 140885
Tssr138148 16 34649893 to 34649917 24 + TSS region transcription start site region 138148
Tssr138149 16 34649920 to 34649944 24 + TSS region transcription start site region 138149
Ropn1 16 34649921 to 34678618 28697 + protein coding gene ropporin, rhophilin associated protein 1
Tssr138150 16 34649948 to 34649957 9 + TSS region transcription start site region 138150
Tssr138151 16 34651202 to 34651219 17 + TSS region transcription start site region 138151
Tssr138152 16 34651226 to 34651235 9 + TSS region transcription start site region 138152
Tssr138153 16 34660752 to 34660758 6 + TSS region transcription start site region 138153
Gm35150 16 34683046 to 34690706 7660 - lncRNA gene predicted gene, 35150
Tssr138154 16 34690548 to 34690559 11 + TSS region transcription start site region 138154
Cpgi8218 16 34690551 to 34691043 492 CpG island CpG island 8218
Ccdc14 16 34690616 to 34725202 34586 + protein coding gene coiled-coil domain containing 14
Tssr138155 16 34690703 to 34690720 17 + TSS region transcription start site region 138155
Tssr138156 16 34690748 to 34690774 26 + TSS region transcription start site region 138156
Cpgi8219 16 34744906 to 34745657 751 CpG island CpG island 8219
Tssr138157 16 34745201 to 34745216 15 + TSS region transcription start site region 138157
Mylk 16 34745210 to 35002420 257210 + protein coding gene myosin, light polypeptide kinase
Tssr138158 16 34784779 to 34784793 14 + TSS region transcription start site region 138158
Tssr138159 16 34784876 to 34784886 10 + TSS region transcription start site region 138159
Tssr138160 16 34784896 to 34784909 13 + TSS region transcription start site region 138160
Tssr138161 16 34784917 to 34784935 18 + TSS region transcription start site region 138161
Tssr138162 16 34807199 to 34807217 18 + TSS region transcription start site region 138162
Tssr138163 16 34807225 to 34807309 84 + TSS region transcription start site region 138163
Tssr138164 16 34807321 to 34807344 23 + TSS region transcription start site region 138164
Tssr138165 16 34819607 to 34819608 1 + TSS region transcription start site region 138165
Tssr138166 16 34883432 to 34883441 9 + TSS region transcription start site region 138166
Tssr138167 16 34883526 to 34883545 19 + TSS region transcription start site region 138167
Tssr138168 16 34887611 to 34887615 4 + TSS region transcription start site region 138168
Tssr138169 16 34900231 to 34900248 17 + TSS region transcription start site region 138169
Tssr4859 16 34921063 to 34921075 12 + TSS region transcription start site region 4859
Tssr138170 16 34921400 to 34921405 5 + TSS region transcription start site region 138170
Tssr138171 16 34921480 to 34921491 11 + TSS region transcription start site region 138171
Tssr138172 16 34921504 to 34921517 13 + TSS region transcription start site region 138172
Tssr138173 16 34921518 to 34921594 76 + TSS region transcription start site region 138173
Tssr138174 16 34921614 to 34921636 22 + TSS region transcription start site region 138174
Tssr138175 16 34921838 to 34921847 9 + TSS region transcription start site region 138175
Tssr138176 16 34922094 to 34922103 9 + TSS region transcription start site region 138176
Tssr138177 16 34926188 to 34926194 6 + TSS region transcription start site region 138177
Tssr138178 16 34929278 to 34929281 3 + TSS region transcription start site region 138178
Tssr138179 16 34930333 to 34930350 17 + TSS region transcription start site region 138179
1700119H24Rik 16 34935855 to 34939329 3474 - antisense lncRNA gene RIKEN cDNA 1700119H24 gene