Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:3352398-3833339

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm22862 16 3353752 to 3353872 120 - miRNA gene predicted gene, 22862
Gm49505 16 3357957 to 3358206 249 + pseudogene predicted gene, 49505
Vmn1r-ps138 16 3377042 to 3377959 917 - pseudogene vomeronasal 1 receptor, pseudogene 138
Gm49507 16 3448993 to 3507196 58203 - lincRNA gene predicted gene, 49507
n-TLaag1 16 3449838 to 3449909 71 + tRNA gene nuclear encoded tRNA leucine 1 (anticodon AAG)
Gm35974 16 3468460 to 3481051 12591 + lincRNA gene predicted gene, 35974
Gm49508 16 3521772 to 3522099 327 + pseudogene predicted gene, 49508
Gm49509 16 3531012 to 3531291 279 + pseudogene predicted gene, 49509
Gm4116 16 3534391 to 3534825 434 + pseudogene predicted gene 4116
Gm22598 16 3535485 to 3535611 126 - snoRNA gene predicted gene, 22598
Tssr136818 16 3542191 to 3542231 40 + TSS region transcription start site region 136818
Tssr136819 16 3563826 to 3563831 5 + TSS region transcription start site region 136819
Olfr161 16 3592398 to 3593339 941 + protein coding gene olfactory receptor 161
Olfr162-ps1 16 3601932 to 3602865 933 + pseudogene olfactory receptor 162, pseudogene 1
Olfr163-ps1 16 3618582 to 3618788 206 + pseudogene olfactory receptor 163, pseudogene 1
6720473M11Rik 16 3632170 to 3633232 1062 protein coding gene RIKEN cDNA 6720473M11 gene
Tssr139719 16 3633155 to 3633191 36 - TSS region transcription start site region 139719
Tssr4775 16 3706812 to 3706818 6 - TSS region transcription start site region 4775
Mefv 16 3707218 to 3718097 10879 - protein coding gene Mediterranean fever
Tssr4776 16 3714805 to 3714834 29 - TSS region transcription start site region 4776
Tssr139720 16 3718076 to 3718089 13 - TSS region transcription start site region 139720
Tssr139721 16 3718094 to 3718097 3 - TSS region transcription start site region 139721
Tssr139722 16 3718105 to 3718150 45 - TSS region transcription start site region 139722
Tssr139723 16 3718153 to 3718164 11 - TSS region transcription start site region 139723
Tssr136820 16 3723322 to 3723324 2 + TSS region transcription start site region 136820
Tssr139724 16 3723328 to 3723335 7 - TSS region transcription start site region 139724
Tssr139725 16 3723356 to 3723384 28 - TSS region transcription start site region 139725
Tssr136821 16 3723593 to 3723595 2 + TSS region transcription start site region 136821
Tssr136822 16 3730016 to 3730030 14 + TSS region transcription start site region 136822
Tssr136823 16 3730253 to 3730302 49 + TSS region transcription start site region 136823
Tdgf1-ps1 16 3730510 to 3731022 512 + pseudogene teratocarcinoma-derived growth factor, pseudogene 1
Tssr4777 16 3743460 to 3743475 15 + TSS region transcription start site region 4777
Cpgi7899 16 3743543 to 3744723 1180 CpG island CpG island 7899
Tssr136824 16 3744089 to 3744145 56 + TSS region transcription start site region 136824
Zfp263 16 3744099 to 3750790 6691 + protein coding gene zinc finger protein 263
Tssr136825 16 3744146 to 3744157 11 + TSS region transcription start site region 136825
Tssr136826 16 3744162 to 3744180 18 + TSS region transcription start site region 136826
Tssr136827 16 3744192 to 3744206 14 + TSS region transcription start site region 136827
Tssr136828 16 3745794 to 3745849 55 + TSS region transcription start site region 136828
Gm36195 16 3758779 to 3764466 5687 + lncRNA gene predicted gene, 36195
Gm41409 16 3775742 to 3778357 2615 + lincRNA gene predicted gene, 41409