Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:32662224-32842259

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60 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Aod1 16 32312022 to 32704294 392272 QTL autoimmune ovarian dysgenesis 1
Tnk2 16 32644099 to 32683493 39394 + protein coding gene tyrosine kinase, non-receptor, 2
Tnk2os 16 32665223 to 32668197 2974 - antisense lncRNA gene tyrosine kinase, non-receptor 2, opposite strand
Tssr138023 16 32670787 to 32670788 1 + TSS region transcription start site region 138023
Tssr138024 16 32673144 to 32673188 44 + TSS region transcription start site region 138024
Cpgi8196 16 32697988 to 32698203 215 CpG island CpG island 8196
Gm34766 16 32698667 to 32704256 5589 + lncRNA gene predicted gene, 34766
Pstc4 16 32704091 to 32704294 203 QTL periosteal circumference 4
D16Mit60 16 32704091 to 32704294 203 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 60
Arrd3 16 32704091 to 65669666 32965575 QTL age-related retinal degeneration 3
D16Mit193 16 32722083 to 32722281 198 DNA segment DNA Segment, Chr 16, Massachusetts Institute of Technology 193
Gm9556 16 32726666 to 32727605 939 + pseudogene predicted gene 9556
Muc4 16 32735886 to 32782391 46505 + protein coding gene mucin 4
Tssr138025 16 32736263 to 32736281 18 + TSS region transcription start site region 138025
Tssr138026 16 32736286 to 32736304 18 + TSS region transcription start site region 138026
Tssr138027 16 32750332 to 32750343 11 + TSS region transcription start site region 138027
Tssr138028 16 32750400 to 32750411 11 + TSS region transcription start site region 138028
Tssr138029 16 32750477 to 32750521 44 + TSS region transcription start site region 138029
Tssr138030 16 32750633 to 32750648 15 + TSS region transcription start site region 138030
Tssr138031 16 32750651 to 32750662 11 + TSS region transcription start site region 138031
Tssr138032 16 32750688 to 32750707 19 + TSS region transcription start site region 138032
Tssr138033 16 32750811 to 32750824 13 + TSS region transcription start site region 138033
Tssr138034 16 32750880 to 32750900 20 + TSS region transcription start site region 138034
Tssr138035 16 32750914 to 32750931 17 + TSS region transcription start site region 138035
Tssr138036 16 32750945 to 32751029 84 + TSS region transcription start site region 138036
Tssr138037 16 32751035 to 32751049 14 + TSS region transcription start site region 138037
Tssr138038 16 32751058 to 32751069 11 + TSS region transcription start site region 138038
Tssr138039 16 32751142 to 32751165 23 + TSS region transcription start site region 138039
Tssr138040 16 32751225 to 32751237 12 + TSS region transcription start site region 138040
Tssr138041 16 32751337 to 32751354 17 + TSS region transcription start site region 138041
Tssr138042 16 32751363 to 32751373 10 + TSS region transcription start site region 138042
Tssr138043 16 32751378 to 32751391 13 + TSS region transcription start site region 138043
Tssr138044 16 32751431 to 32751443 12 + TSS region transcription start site region 138044
Tssr138045 16 32751469 to 32751487 18 + TSS region transcription start site region 138045
Tssr138046 16 32751561 to 32751605 44 + TSS region transcription start site region 138046
Tssr138047 16 32751688 to 32751703 15 + TSS region transcription start site region 138047
Tssr138048 16 32751713 to 32751734 21 + TSS region transcription start site region 138048
Tssr138049 16 32752224 to 32752259 35 + TSS region transcription start site region 138049
Tssr138050 16 32752592 to 32752619 27 + TSS region transcription start site region 138050
Tssr138051 16 32753474 to 32753512 38 + TSS region transcription start site region 138051
Tssr138052 16 32755375 to 32755398 23 + TSS region transcription start site region 138052
Tssr138053 16 32755634 to 32755640 6 + TSS region transcription start site region 138053
Tssr138054 16 32755746 to 32755776 30 + TSS region transcription start site region 138054
Tssr138055 16 32756107 to 32756119 12 + TSS region transcription start site region 138055
Gm34825 16 32760228 to 32775748 15520 - lncRNA gene predicted gene, 34825
Gm41446 16 32764220 to 32766105 1885 - lncRNA gene predicted gene, 41446
Tssr138056 16 32776282 to 32776286 4 + TSS region transcription start site region 138056
Tssr138057 16 32776299 to 32776313 14 + TSS region transcription start site region 138057
Tssr138058 16 32776330 to 32776335 5 + TSS region transcription start site region 138058
Muc20 16 32777419 to 32797435 20016 - protein coding gene mucin 20
Tssr140821 16 32794675 to 32794688 13 - TSS region transcription start site region 140821
Tssr140822 16 32797372 to 32797377 5 - TSS region transcription start site region 140822
Tssr140823 16 32797413 to 32797461 48 - TSS region transcription start site region 140823
Smbd1 16 32804888 to 32810446 5558 - protein coding gene somatomedin B domain containing 1
Gm26769 16 32807483 to 32811206 3723 + antisense lncRNA gene predicted gene, 26769
Tssr140824 16 32810455 to 32810466 11 - TSS region transcription start site region 140824
Tssr140825 16 32810482 to 32810494 12 - TSS region transcription start site region 140825
Cpgi8197 16 32814518 to 32814798 280 CpG island CpG island 8197
Rubcn 16 32821702 to 32877587 55885 - protein coding gene RUN domain and cysteine-rich domain containing, Beclin 1-interacting protein
Tssr138059 16 32822087 to 32822088 1 + TSS region transcription start site region 138059