Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:32450729-32650755

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64 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pcyt1a 16 32430921 to 32475065 44144 + protein coding gene phosphate cytidylyltransferase 1, choline, alpha isoform
2210020O09Rik 16 32454598 to 32456149 1551 - antisense lncRNA gene RIKEN cDNA 2210020O09 gene
Tssr137987 16 32467180 to 32467184 4 + TSS region transcription start site region 137987
Tssr137988 16 32471496 to 32471530 34 + TSS region transcription start site region 137988
Slc51a 16 32475578 to 32487879 12301 - protein coding gene solute carrier family 51, alpha subunit
Tssr140805 16 32477627 to 32477634 7 - TSS region transcription start site region 140805
Tssr140806 16 32486168 to 32486175 7 - TSS region transcription start site region 140806
Tssr140807 16 32487152 to 32487161 9 - TSS region transcription start site region 140807
Tssr140808 16 32487168 to 32487191 23 - TSS region transcription start site region 140808
Tssr140809 16 32487195 to 32487219 24 - TSS region transcription start site region 140809
Tssr140810 16 32487225 to 32487290 65 - TSS region transcription start site region 140810
Tssr4846 16 32487596 to 32487602 6 - TSS region transcription start site region 4846
Tssr4847 16 32487615 to 32487632 17 - TSS region transcription start site region 4847
Tssr140811 16 32487643 to 32487659 16 - TSS region transcription start site region 140811
Tssr140812 16 32487667 to 32487722 55 - TSS region transcription start site region 140812
Tssr140813 16 32487809 to 32487824 15 - TSS region transcription start site region 140813
Tssr140814 16 32487873 to 32487895 22 - TSS region transcription start site region 140814
Tssr140815 16 32487897 to 32487918 21 - TSS region transcription start site region 140815
Tssr137989 16 32488093 to 32488131 38 + TSS region transcription start site region 137989
Tssr140816 16 32496149 to 32496160 11 - TSS region transcription start site region 140816
Zdhhc19 16 32496241 to 32507214 10973 + protein coding gene zinc finger, DHHC domain containing 19
Tssr137990 16 32496259 to 32496267 8 + TSS region transcription start site region 137990
Tssr137991 16 32496272 to 32496284 12 + TSS region transcription start site region 137991
Cpgi8191 16 32499540 to 32500037 497 CpG island CpG island 8191
Tssr140817 16 32520535 to 32520546 11 - TSS region transcription start site region 140817
Tssr140818 16 32520549 to 32520573 24 - TSS region transcription start site region 140818
Tssr137992 16 32520788 to 32520816 28 + TSS region transcription start site region 137992
Tssr140819 16 32522304 to 32522319 15 - TSS region transcription start site region 140819
Tssr4848 16 32539113 to 32539118 5 + TSS region transcription start site region 4848
Tssr140820 16 32550130 to 32550176 46 - TSS region transcription start site region 140820
Gm34680 16 32550211 to 32553708 3497 + lincRNA gene predicted gene, 34680
Tssr137993 16 32550235 to 32550269 34 + TSS region transcription start site region 137993
Tssr137994 16 32550298 to 32550309 11 + TSS region transcription start site region 137994
Tssr137995 16 32550317 to 32550335 18 + TSS region transcription start site region 137995
Tssr137996 16 32550337 to 32550355 18 + TSS region transcription start site region 137996
Tssr137997 16 32550729 to 32550755 26 + TSS region transcription start site region 137997
Tssr137998 16 32551816 to 32551820 4 + TSS region transcription start site region 137998
Tssr137999 16 32551854 to 32551870 16 + TSS region transcription start site region 137999
Gm5405 16 32591301 to 32591909 608 - pseudogene predicted gene 5405
Cpgi8192 16 32608632 to 32609530 898 CpG island CpG island 8192
Tssr138000 16 32608842 to 32608853 11 + TSS region transcription start site region 138000
Tfrc 16 32608920 to 32632794 23874 + protein coding gene transferrin receptor
Tssr138001 16 32608935 to 32608945 10 + TSS region transcription start site region 138001
Tssr138002 16 32608955 to 32608964 9 + TSS region transcription start site region 138002
Tssr138003 16 32608973 to 32608990 17 + TSS region transcription start site region 138003
Tssr138004 16 32611775 to 32611779 4 + TSS region transcription start site region 138004
Tssr138005 16 32613536 to 32613549 13 + TSS region transcription start site region 138005
Tssr138006 16 32621472 to 32621479 7 + TSS region transcription start site region 138006
Tssr138007 16 32621571 to 32621573 2 + TSS region transcription start site region 138007
Tssr138008 16 32628472 to 32628492 20 + TSS region transcription start site region 138008
Tssr138009 16 32630093 to 32630106 13 + TSS region transcription start site region 138009
Tssr138010 16 32630111 to 32630120 9 + TSS region transcription start site region 138010
Tssr138011 16 32630688 to 32630730 42 + TSS region transcription start site region 138011
Tssr138012 16 32630842 to 32630987 145 + TSS region transcription start site region 138012
Tssr138013 16 32631018 to 32631030 12 + TSS region transcription start site region 138013
Tssr138014 16 32631202 to 32631215 13 + TSS region transcription start site region 138014
Tssr138015 16 32631633 to 32631650 17 + TSS region transcription start site region 138015
Tssr138016 16 32641508 to 32641515 7 + TSS region transcription start site region 138016
Cpgi8193 16 32642418 to 32642593 175 CpG island CpG island 8193
Cpgi8194 16 32643701 to 32645288 1587 CpG island CpG island 8194
Tssr138017 16 32643847 to 32643916 69 + TSS region transcription start site region 138017
Tnk2 16 32644099 to 32683493 39394 + protein coding gene tyrosine kinase, non-receptor, 2
Tssr138018 16 32644110 to 32644145 35 + TSS region transcription start site region 138018
Tssr138019 16 32650524 to 32650528 4 + TSS region transcription start site region 138019