Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:32331168-32641175

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87 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi8188 16 32332019 to 32333335 1316 CpG island CpG island 8188
Tssr137967 16 32332238 to 32332266 28 + TSS region transcription start site region 137967
Ubxn7 16 32332257 to 32393747 61490 + protein coding gene UBX domain protein 7
Tssr137968 16 32375964 to 32375995 31 + TSS region transcription start site region 137968
Tssr137969 16 32379936 to 32379941 5 + TSS region transcription start site region 137969
Tssr137970 16 32385098 to 32385113 15 + TSS region transcription start site region 137970
Tssr137971 16 32388777 to 32388781 4 + TSS region transcription start site region 137971
Tm4sf19 16 32400506 to 32408227 7721 + protein coding gene transmembrane 4 L six family member 19
Tssr137972 16 32400657 to 32400668 11 + TSS region transcription start site region 137972
Tssr137973 16 32400725 to 32400734 9 + TSS region transcription start site region 137973
Tssr137974 16 32400771 to 32400785 14 + TSS region transcription start site region 137974
Tssr137975 16 32400802 to 32400813 11 + TSS region transcription start site region 137975
Tssr137976 16 32400821 to 32400834 13 + TSS region transcription start site region 137976
Tssr140803 16 32402915 to 32402937 22 - TSS region transcription start site region 140803
Gm20056 16 32408536 to 32409054 518 + pseudogene predicted gene, 20056
Cpgi8189 16 32419558 to 32420122 564 CpG island CpG island 8189
Tssr137977 16 32419696 to 32419753 57 + TSS region transcription start site region 137977
Tctex1d2 16 32419702 to 32429099 9397 + protein coding gene Tctex1 domain containing 2
Tssr137978 16 32419761 to 32419799 38 + TSS region transcription start site region 137978
Cpgi8190 16 32430421 to 32431649 1228 CpG island CpG island 8190
Tssr137979 16 32430607 to 32430618 11 + TSS region transcription start site region 137979
Tssr137980 16 32430895 to 32430978 83 + TSS region transcription start site region 137980
Pcyt1a 16 32430921 to 32475065 44144 + protein coding gene phosphate cytidylyltransferase 1, choline, alpha isoform
Tssr137981 16 32430985 to 32430990 5 + TSS region transcription start site region 137981
Tssr137982 16 32431023 to 32431034 11 + TSS region transcription start site region 137982
Tssr137983 16 32431043 to 32431054 11 + TSS region transcription start site region 137983
Tssr140804 16 32431078 to 32431117 39 - TSS region transcription start site region 140804
Tssr137984 16 32431092 to 32431102 10 + TSS region transcription start site region 137984
Tssr137985 16 32431225 to 32431280 55 + TSS region transcription start site region 137985
Tssr137986 16 32431290 to 32431308 18 + TSS region transcription start site region 137986
9030420N05Rik 16 32436746 to 32438933 2187 unclassified gene RIKEN cDNA 9030420N05 gene
2210020O09Rik 16 32454598 to 32456149 1551 - antisense lncRNA gene RIKEN cDNA 2210020O09 gene
Tssr137987 16 32467180 to 32467184 4 + TSS region transcription start site region 137987
Tssr137988 16 32471496 to 32471530 34 + TSS region transcription start site region 137988
Slc51a 16 32475578 to 32487879 12301 - protein coding gene solute carrier family 51, alpha subunit
Tssr140805 16 32477627 to 32477634 7 - TSS region transcription start site region 140805
Tssr140806 16 32486168 to 32486175 7 - TSS region transcription start site region 140806
Tssr140807 16 32487152 to 32487161 9 - TSS region transcription start site region 140807
Tssr140808 16 32487168 to 32487191 23 - TSS region transcription start site region 140808
Tssr140809 16 32487195 to 32487219 24 - TSS region transcription start site region 140809
Tssr140810 16 32487225 to 32487290 65 - TSS region transcription start site region 140810
Tssr4846 16 32487596 to 32487602 6 - TSS region transcription start site region 4846
Tssr4847 16 32487615 to 32487632 17 - TSS region transcription start site region 4847
Tssr140811 16 32487643 to 32487659 16 - TSS region transcription start site region 140811
Tssr140812 16 32487667 to 32487722 55 - TSS region transcription start site region 140812
Tssr140813 16 32487809 to 32487824 15 - TSS region transcription start site region 140813
Tssr140814 16 32487873 to 32487895 22 - TSS region transcription start site region 140814
Tssr140815 16 32487897 to 32487918 21 - TSS region transcription start site region 140815
Tssr137989 16 32488093 to 32488131 38 + TSS region transcription start site region 137989
Tssr140816 16 32496149 to 32496160 11 - TSS region transcription start site region 140816
Zdhhc19 16 32496241 to 32507214 10973 + protein coding gene zinc finger, DHHC domain containing 19
Tssr137990 16 32496259 to 32496267 8 + TSS region transcription start site region 137990
Tssr137991 16 32496272 to 32496284 12 + TSS region transcription start site region 137991
Cpgi8191 16 32499540 to 32500037 497 CpG island CpG island 8191
Tssr140817 16 32520535 to 32520546 11 - TSS region transcription start site region 140817
Tssr140818 16 32520549 to 32520573 24 - TSS region transcription start site region 140818
Tssr137992 16 32520788 to 32520816 28 + TSS region transcription start site region 137992
Tssr140819 16 32522304 to 32522319 15 - TSS region transcription start site region 140819
Tssr4848 16 32539113 to 32539118 5 + TSS region transcription start site region 4848
Tssr140820 16 32550130 to 32550176 46 - TSS region transcription start site region 140820
Gm34680 16 32550211 to 32553708 3497 + lincRNA gene predicted gene, 34680
Tssr137993 16 32550235 to 32550269 34 + TSS region transcription start site region 137993
Tssr137994 16 32550298 to 32550309 11 + TSS region transcription start site region 137994
Tssr137995 16 32550317 to 32550335 18 + TSS region transcription start site region 137995
Tssr137996 16 32550337 to 32550355 18 + TSS region transcription start site region 137996
Tssr137997 16 32550729 to 32550755 26 + TSS region transcription start site region 137997
Tssr137998 16 32551816 to 32551820 4 + TSS region transcription start site region 137998
Tssr137999 16 32551854 to 32551870 16 + TSS region transcription start site region 137999
Gm5405 16 32591301 to 32591909 608 - pseudogene predicted gene 5405
Cpgi8192 16 32608632 to 32609530 898 CpG island CpG island 8192
Tssr138000 16 32608842 to 32608853 11 + TSS region transcription start site region 138000
Tfrc 16 32608920 to 32632794 23874 + protein coding gene transferrin receptor
Tssr138001 16 32608935 to 32608945 10 + TSS region transcription start site region 138001
Tssr138002 16 32608955 to 32608964 9 + TSS region transcription start site region 138002
Tssr138003 16 32608973 to 32608990 17 + TSS region transcription start site region 138003
Tssr138004 16 32611775 to 32611779 4 + TSS region transcription start site region 138004
Tssr138005 16 32613536 to 32613549 13 + TSS region transcription start site region 138005
Tssr138006 16 32621472 to 32621479 7 + TSS region transcription start site region 138006
Tssr138007 16 32621571 to 32621573 2 + TSS region transcription start site region 138007
Tssr138008 16 32628472 to 32628492 20 + TSS region transcription start site region 138008
Tssr138009 16 32630093 to 32630106 13 + TSS region transcription start site region 138009
Tssr138010 16 32630111 to 32630120 9 + TSS region transcription start site region 138010
Tssr138011 16 32630688 to 32630730 42 + TSS region transcription start site region 138011
Tssr138012 16 32630842 to 32630987 145 + TSS region transcription start site region 138012
Tssr138013 16 32631018 to 32631030 12 + TSS region transcription start site region 138013
Tssr138014 16 32631202 to 32631215 13 + TSS region transcription start site region 138014
Tssr138015 16 32631633 to 32631650 17 + TSS region transcription start site region 138015