Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:32266241-32737214

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131 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
nmf219 16 15913052 to 32312179 16399127 heritable phenotypic marker neuroscience mutagenesis facility, 219
Mir1946a 16 32267450 to 32267583 133 - miRNA gene microRNA 1946a
Tssr137957 16 32271473 to 32271523 50 + TSS region transcription start site region 137957
Tssr137958 16 32271530 to 32271544 14 + TSS region transcription start site region 137958
Tssr137959 16 32271545 to 32271559 14 + TSS region transcription start site region 137959
Smco1 16 32271609 to 32274779 3170 + protein coding gene single-pass membrane protein with coiled-coil domains 1
Cpgi8187 16 32277321 to 32278321 1000 CpG island CpG island 8187
Tssr137960 16 32277449 to 32277462 13 + TSS region transcription start site region 137960
Rnf168 16 32277459 to 32301434 23975 + protein coding gene ring finger protein 168
Tssr137961 16 32277479 to 32277524 45 + TSS region transcription start site region 137961
Tssr137962 16 32277528 to 32277566 38 + TSS region transcription start site region 137962
Tssr137963 16 32277648 to 32277651 3 + TSS region transcription start site region 137963
5830438M01Rik 16 32303126 to 32304493 1367 unclassified gene RIKEN cDNA 5830438M01 gene
Tssr137964 16 32303809 to 32303813 4 + TSS region transcription start site region 137964
D16Mit58 16 32312022 to 32312179 157 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 58
Aod1 16 32312022 to 32704294 392272 QTL autoimmune ovarian dysgenesis 1
repro33 16 32312022 to 97830295 65518273 heritable phenotypic marker reproductive mutant 33, JAX Reproductive Mutagenesis Program
Tssr137965 16 32312541 to 32312544 3 + TSS region transcription start site region 137965
Tssr137966 16 32324321 to 32324330 9 + TSS region transcription start site region 137966
Gm8387 16 32326181 to 32326695 514 - pseudogene predicted gene 8387
Cpgi8188 16 32332019 to 32333335 1316 CpG island CpG island 8188
Tssr137967 16 32332238 to 32332266 28 + TSS region transcription start site region 137967
Ubxn7 16 32332257 to 32393747 61490 + protein coding gene UBX domain protein 7
Tssr137968 16 32375964 to 32375995 31 + TSS region transcription start site region 137968
Tssr137969 16 32379936 to 32379941 5 + TSS region transcription start site region 137969
Tssr137970 16 32385098 to 32385113 15 + TSS region transcription start site region 137970
Tssr137971 16 32388777 to 32388781 4 + TSS region transcription start site region 137971
Tm4sf19 16 32400506 to 32408227 7721 + protein coding gene transmembrane 4 L six family member 19
Tssr137972 16 32400657 to 32400668 11 + TSS region transcription start site region 137972
Tssr137973 16 32400725 to 32400734 9 + TSS region transcription start site region 137973
Tssr137974 16 32400771 to 32400785 14 + TSS region transcription start site region 137974
Tssr137975 16 32400802 to 32400813 11 + TSS region transcription start site region 137975
Tssr137976 16 32400821 to 32400834 13 + TSS region transcription start site region 137976
Tssr140803 16 32402915 to 32402937 22 - TSS region transcription start site region 140803
Gm20056 16 32408536 to 32409054 518 + pseudogene predicted gene, 20056
Cpgi8189 16 32419558 to 32420122 564 CpG island CpG island 8189
Tssr137977 16 32419696 to 32419753 57 + TSS region transcription start site region 137977
Tctex1d2 16 32419702 to 32429099 9397 + protein coding gene Tctex1 domain containing 2
Tssr137978 16 32419761 to 32419799 38 + TSS region transcription start site region 137978
Cpgi8190 16 32430421 to 32431649 1228 CpG island CpG island 8190
Tssr137979 16 32430607 to 32430618 11 + TSS region transcription start site region 137979
Tssr137980 16 32430895 to 32430978 83 + TSS region transcription start site region 137980
Pcyt1a 16 32430921 to 32475065 44144 + protein coding gene phosphate cytidylyltransferase 1, choline, alpha isoform
Tssr137981 16 32430985 to 32430990 5 + TSS region transcription start site region 137981
Tssr137982 16 32431023 to 32431034 11 + TSS region transcription start site region 137982
Tssr137983 16 32431043 to 32431054 11 + TSS region transcription start site region 137983
Tssr140804 16 32431078 to 32431117 39 - TSS region transcription start site region 140804
Tssr137984 16 32431092 to 32431102 10 + TSS region transcription start site region 137984
Tssr137985 16 32431225 to 32431280 55 + TSS region transcription start site region 137985
Tssr137986 16 32431290 to 32431308 18 + TSS region transcription start site region 137986
9030420N05Rik 16 32436746 to 32438933 2187 unclassified gene RIKEN cDNA 9030420N05 gene
2210020O09Rik 16 32454598 to 32456149 1551 - antisense lncRNA gene RIKEN cDNA 2210020O09 gene
Tssr137987 16 32467180 to 32467184 4 + TSS region transcription start site region 137987
Tssr137988 16 32471496 to 32471530 34 + TSS region transcription start site region 137988
Slc51a 16 32475578 to 32487879 12301 - protein coding gene solute carrier family 51, alpha subunit
Tssr140805 16 32477627 to 32477634 7 - TSS region transcription start site region 140805
Tssr140806 16 32486168 to 32486175 7 - TSS region transcription start site region 140806
Tssr140807 16 32487152 to 32487161 9 - TSS region transcription start site region 140807
Tssr140808 16 32487168 to 32487191 23 - TSS region transcription start site region 140808
Tssr140809 16 32487195 to 32487219 24 - TSS region transcription start site region 140809
Tssr140810 16 32487225 to 32487290 65 - TSS region transcription start site region 140810
Tssr4846 16 32487596 to 32487602 6 - TSS region transcription start site region 4846
Tssr4847 16 32487615 to 32487632 17 - TSS region transcription start site region 4847
Tssr140811 16 32487643 to 32487659 16 - TSS region transcription start site region 140811
Tssr140812 16 32487667 to 32487722 55 - TSS region transcription start site region 140812
Tssr140813 16 32487809 to 32487824 15 - TSS region transcription start site region 140813
Tssr140814 16 32487873 to 32487895 22 - TSS region transcription start site region 140814
Tssr140815 16 32487897 to 32487918 21 - TSS region transcription start site region 140815
Tssr137989 16 32488093 to 32488131 38 + TSS region transcription start site region 137989
Tssr140816 16 32496149 to 32496160 11 - TSS region transcription start site region 140816
Zdhhc19 16 32496241 to 32507214 10973 + protein coding gene zinc finger, DHHC domain containing 19
Tssr137990 16 32496259 to 32496267 8 + TSS region transcription start site region 137990
Tssr137991 16 32496272 to 32496284 12 + TSS region transcription start site region 137991
Cpgi8191 16 32499540 to 32500037 497 CpG island CpG island 8191
Tssr140817 16 32520535 to 32520546 11 - TSS region transcription start site region 140817
Tssr140818 16 32520549 to 32520573 24 - TSS region transcription start site region 140818
Tssr137992 16 32520788 to 32520816 28 + TSS region transcription start site region 137992
Tssr140819 16 32522304 to 32522319 15 - TSS region transcription start site region 140819
Tssr4848 16 32539113 to 32539118 5 + TSS region transcription start site region 4848
Tssr140820 16 32550130 to 32550176 46 - TSS region transcription start site region 140820
Gm34680 16 32550211 to 32553708 3497 + lincRNA gene predicted gene, 34680
Tssr137993 16 32550235 to 32550269 34 + TSS region transcription start site region 137993
Tssr137994 16 32550298 to 32550309 11 + TSS region transcription start site region 137994
Tssr137995 16 32550317 to 32550335 18 + TSS region transcription start site region 137995
Tssr137996 16 32550337 to 32550355 18 + TSS region transcription start site region 137996
Tssr137997 16 32550729 to 32550755 26 + TSS region transcription start site region 137997
Tssr137998 16 32551816 to 32551820 4 + TSS region transcription start site region 137998
Tssr137999 16 32551854 to 32551870 16 + TSS region transcription start site region 137999
Gm5405 16 32591301 to 32591909 608 - pseudogene predicted gene 5405
Cpgi8192 16 32608632 to 32609530 898 CpG island CpG island 8192
Tssr138000 16 32608842 to 32608853 11 + TSS region transcription start site region 138000
Tfrc 16 32608920 to 32632794 23874 + protein coding gene transferrin receptor
Tssr138001 16 32608935 to 32608945 10 + TSS region transcription start site region 138001
Tssr138002 16 32608955 to 32608964 9 + TSS region transcription start site region 138002
Tssr138003 16 32608973 to 32608990 17 + TSS region transcription start site region 138003
Tssr138004 16 32611775 to 32611779 4 + TSS region transcription start site region 138004
Tssr138005 16 32613536 to 32613549 13 + TSS region transcription start site region 138005
Tssr138006 16 32621472 to 32621479 7 + TSS region transcription start site region 138006
Tssr138007 16 32621571 to 32621573 2 + TSS region transcription start site region 138007
Tssr138008 16 32628472 to 32628492 20 + TSS region transcription start site region 138008
Tssr138009 16 32630093 to 32630106 13 + TSS region transcription start site region 138009
Tssr138010 16 32630111 to 32630120 9 + TSS region transcription start site region 138010
Tssr138011 16 32630688 to 32630730 42 + TSS region transcription start site region 138011
Tssr138012 16 32630842 to 32630987 145 + TSS region transcription start site region 138012
Tssr138013 16 32631018 to 32631030 12 + TSS region transcription start site region 138013
Tssr138014 16 32631202 to 32631215 13 + TSS region transcription start site region 138014
Tssr138015 16 32631633 to 32631650 17 + TSS region transcription start site region 138015
Tssr138016 16 32641508 to 32641515 7 + TSS region transcription start site region 138016
Cpgi8193 16 32642418 to 32642593 175 CpG island CpG island 8193
Cpgi8194 16 32643701 to 32645288 1587 CpG island CpG island 8194
Tssr138017 16 32643847 to 32643916 69 + TSS region transcription start site region 138017
Tnk2 16 32644099 to 32683493 39394 + protein coding gene tyrosine kinase, non-receptor, 2
Tssr138018 16 32644110 to 32644145 35 + TSS region transcription start site region 138018
Tssr138019 16 32650524 to 32650528 4 + TSS region transcription start site region 138019
Tssr138020 16 32650771 to 32650775 4 + TSS region transcription start site region 138020
Cpgi8195 16 32658802 to 32659207 405 CpG island CpG island 8195
Tssr138021 16 32658904 to 32658949 45 + TSS region transcription start site region 138021
Tssr138022 16 32661223 to 32661245 22 + TSS region transcription start site region 138022
Tnk2os 16 32665223 to 32668197 2974 - antisense lncRNA gene tyrosine kinase, non-receptor 2, opposite strand
Tssr138023 16 32670787 to 32670788 1 + TSS region transcription start site region 138023
Tssr138024 16 32673144 to 32673188 44 + TSS region transcription start site region 138024
Cpgi8196 16 32697988 to 32698203 215 CpG island CpG island 8196
Gm34766 16 32698667 to 32704256 5589 + lncRNA gene predicted gene, 34766
Arrd3 16 32704091 to 65669666 32965575 QTL age-related retinal degeneration 3
D16Mit60 16 32704091 to 32704294 203 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 60
Pstc4 16 32704091 to 32704294 203 QTL periosteal circumference 4
D16Mit193 16 32722083 to 32722281 198 DNA segment DNA Segment, Chr 16, Massachusetts Institute of Technology 193
Gm9556 16 32726666 to 32727605 939 + pseudogene predicted gene 9556
Muc4 16 32735886 to 32782391 46505 + protein coding gene mucin 4
Tssr138025 16 32736263 to 32736281 18 + TSS region transcription start site region 138025
Tssr138026 16 32736286 to 32736304 18 + TSS region transcription start site region 138026