Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:32181181-32471695

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66 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
nmf219 16 15913052 to 32312179 16399127 heritable phenotypic marker neuroscience mutagenesis facility, 219
Bex6 16 32179800 to 32186944 7144 + protein coding gene brain expressed family member 6
Tssr137955 16 32183932 to 32183934 2 + TSS region transcription start site region 137955
Fbxo45 16 32230112 to 32247025 16913 - protein coding gene F-box protein 45
5730596P11Rik 16 32241064 to 32242828 1764 unclassified gene RIKEN cDNA 5730596P11 gene
Gm25848 16 32243712 to 32243855 143 - snoRNA gene predicted gene, 25848
Tssr140799 16 32243852 to 32243855 3 - TSS region transcription start site region 140799
Cpgi8186 16 32246308 to 32247496 1188 CpG island CpG island 8186
Tssr140800 16 32246879 to 32246947 68 - TSS region transcription start site region 140800
Tssr140801 16 32247103 to 32247148 45 - TSS region transcription start site region 140801
Tssr140802 16 32247152 to 32247179 27 - TSS region transcription start site region 140802
Tssr137956 16 32247221 to 32247283 62 + TSS region transcription start site region 137956
Wdr53 16 32247227 to 32257083 9856 + protein coding gene WD repeat domain 53
Mir1946a 16 32267450 to 32267583 133 - miRNA gene microRNA 1946a
Tssr137957 16 32271473 to 32271523 50 + TSS region transcription start site region 137957
Tssr137958 16 32271530 to 32271544 14 + TSS region transcription start site region 137958
Tssr137959 16 32271545 to 32271559 14 + TSS region transcription start site region 137959
Smco1 16 32271609 to 32274779 3170 + protein coding gene single-pass membrane protein with coiled-coil domains 1
Cpgi8187 16 32277321 to 32278321 1000 CpG island CpG island 8187
Tssr137960 16 32277449 to 32277462 13 + TSS region transcription start site region 137960
Rnf168 16 32277459 to 32301434 23975 + protein coding gene ring finger protein 168
Tssr137961 16 32277479 to 32277524 45 + TSS region transcription start site region 137961
Tssr137962 16 32277528 to 32277566 38 + TSS region transcription start site region 137962
Tssr137963 16 32277648 to 32277651 3 + TSS region transcription start site region 137963
5830438M01Rik 16 32303126 to 32304493 1367 unclassified gene RIKEN cDNA 5830438M01 gene
Tssr137964 16 32303809 to 32303813 4 + TSS region transcription start site region 137964
repro33 16 32312022 to 97830295 65518273 heritable phenotypic marker reproductive mutant 33, JAX Reproductive Mutagenesis Program
Aod1 16 32312022 to 32704294 392272 QTL autoimmune ovarian dysgenesis 1
D16Mit58 16 32312022 to 32312179 157 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 58
Tssr137965 16 32312541 to 32312544 3 + TSS region transcription start site region 137965
Tssr137966 16 32324321 to 32324330 9 + TSS region transcription start site region 137966
Gm8387 16 32326181 to 32326695 514 - pseudogene predicted gene 8387
Cpgi8188 16 32332019 to 32333335 1316 CpG island CpG island 8188
Tssr137967 16 32332238 to 32332266 28 + TSS region transcription start site region 137967
Ubxn7 16 32332257 to 32393747 61490 + protein coding gene UBX domain protein 7
Tssr137968 16 32375964 to 32375995 31 + TSS region transcription start site region 137968
Tssr137969 16 32379936 to 32379941 5 + TSS region transcription start site region 137969
Tssr137970 16 32385098 to 32385113 15 + TSS region transcription start site region 137970
Tssr137971 16 32388777 to 32388781 4 + TSS region transcription start site region 137971
Tm4sf19 16 32400506 to 32408227 7721 + protein coding gene transmembrane 4 L six family member 19
Tssr137972 16 32400657 to 32400668 11 + TSS region transcription start site region 137972
Tssr137973 16 32400725 to 32400734 9 + TSS region transcription start site region 137973
Tssr137974 16 32400771 to 32400785 14 + TSS region transcription start site region 137974
Tssr137975 16 32400802 to 32400813 11 + TSS region transcription start site region 137975
Tssr137976 16 32400821 to 32400834 13 + TSS region transcription start site region 137976
Tssr140803 16 32402915 to 32402937 22 - TSS region transcription start site region 140803
Gm20056 16 32408536 to 32409054 518 + pseudogene predicted gene, 20056
Cpgi8189 16 32419558 to 32420122 564 CpG island CpG island 8189
Tssr137977 16 32419696 to 32419753 57 + TSS region transcription start site region 137977
Tctex1d2 16 32419702 to 32429099 9397 + protein coding gene Tctex1 domain containing 2
Tssr137978 16 32419761 to 32419799 38 + TSS region transcription start site region 137978
Cpgi8190 16 32430421 to 32431649 1228 CpG island CpG island 8190
Tssr137979 16 32430607 to 32430618 11 + TSS region transcription start site region 137979
Tssr137980 16 32430895 to 32430978 83 + TSS region transcription start site region 137980
Pcyt1a 16 32430921 to 32475065 44144 + protein coding gene phosphate cytidylyltransferase 1, choline, alpha isoform
Tssr137981 16 32430985 to 32430990 5 + TSS region transcription start site region 137981
Tssr137982 16 32431023 to 32431034 11 + TSS region transcription start site region 137982
Tssr137983 16 32431043 to 32431054 11 + TSS region transcription start site region 137983
Tssr140804 16 32431078 to 32431117 39 - TSS region transcription start site region 140804
Tssr137984 16 32431092 to 32431102 10 + TSS region transcription start site region 137984
Tssr137985 16 32431225 to 32431280 55 + TSS region transcription start site region 137985
Tssr137986 16 32431290 to 32431308 18 + TSS region transcription start site region 137986
9030420N05Rik 16 32436746 to 32438933 2187 unclassified gene RIKEN cDNA 9030420N05 gene
2210020O09Rik 16 32454598 to 32456149 1551 - antisense lncRNA gene RIKEN cDNA 2210020O09 gene
Tssr137987 16 32467180 to 32467184 4 + TSS region transcription start site region 137987
Tssr137988 16 32471496 to 32471530 34 + TSS region transcription start site region 137988