Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:31997785-32310594

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94 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Senp5 16 31959672 to 32003287 43615 - protein coding gene SUMO/sentrin specific peptidase 5
Cpgi8181 16 32002596 to 32003490 894 CpG island CpG island 8181
Tssr140762 16 32003049 to 32003058 9 - TSS region transcription start site region 140762
Tssr140763 16 32003122 to 32003183 61 - TSS region transcription start site region 140763
Tssr137937 16 32003220 to 32003266 46 + TSS region transcription start site region 137937
Tssr140764 16 32010110 to 32010138 28 - TSS region transcription start site region 140764
Pak2 16 32016290 to 32079342 63052 - protein coding gene p21 (RAC1) activated kinase 2
Tssr140765 16 32017823 to 32017827 4 - TSS region transcription start site region 140765
Tssr140766 16 32019490 to 32019501 11 - TSS region transcription start site region 140766
Tssr140767 16 32019587 to 32019600 13 - TSS region transcription start site region 140767
Tssr140768 16 32027074 to 32027107 33 - TSS region transcription start site region 140768
Tssr140769 16 32052323 to 32052350 27 - TSS region transcription start site region 140769
Gm26419 16 32065910 to 32066042 132 + snoRNA gene predicted gene, 26419
Tssr140770 16 32073791 to 32073808 17 - TSS region transcription start site region 140770
Tssr140771 16 32078081 to 32078085 4 - TSS region transcription start site region 140771
Tssr137938 16 32078225 to 32078234 9 + TSS region transcription start site region 137938
Cpgi8182 16 32078749 to 32079673 924 CpG island CpG island 8182
Tssr140772 16 32079124 to 32079159 35 - TSS region transcription start site region 140772
Tssr140773 16 32079170 to 32079183 13 - TSS region transcription start site region 140773
Tssr140774 16 32079227 to 32079241 14 - TSS region transcription start site region 140774
Tssr140775 16 32079270 to 32079368 98 - TSS region transcription start site region 140775
Pigx 16 32084416 to 32099727 15311 - protein coding gene phosphatidylinositol glycan anchor biosynthesis, class X
Cpgi8183 16 32099031 to 32100122 1091 CpG island CpG island 8183
Tssr140776 16 32099620 to 32099635 15 - TSS region transcription start site region 140776
Tssr140777 16 32099669 to 32099696 27 - TSS region transcription start site region 140777
Tssr140778 16 32099697 to 32099752 55 - TSS region transcription start site region 140778
Tssr137939 16 32099781 to 32099857 76 + TSS region transcription start site region 137939
Cep19 16 32099802 to 32108054 8252 + protein coding gene centrosomal protein 19
Tssr137940 16 32099904 to 32099973 69 + TSS region transcription start site region 137940
Tssr137941 16 32100040 to 32100055 15 + TSS region transcription start site region 137941
Tssr137942 16 32102531 to 32102541 10 + TSS region transcription start site region 137942
Tssr137943 16 32102926 to 32102938 12 + TSS region transcription start site region 137943
Tssr137944 16 32105086 to 32105122 36 + TSS region transcription start site region 137944
Tssr137945 16 32108860 to 32108879 19 + TSS region transcription start site region 137945
Gm15729 16 32108865 to 32113743 4878 + lincRNA gene predicted gene 15729
Tssr4844 16 32109087 to 32109126 39 + TSS region transcription start site region 4844
Tssr137946 16 32114671 to 32114674 3 + TSS region transcription start site region 137946
Tssr4845 16 32118031 to 32118033 2 - TSS region transcription start site region 4845
Tssr140779 16 32130309 to 32130336 27 - TSS region transcription start site region 140779
Tssr140780 16 32136037 to 32136040 3 - TSS region transcription start site region 140780
Nrros 16 32142785 to 32165589 22804 - protein coding gene negative regulator of reactive oxygen species
Tssr137947 16 32142786 to 32142790 4 + TSS region transcription start site region 137947
Tssr137948 16 32142819 to 32142826 7 + TSS region transcription start site region 137948
Tssr140781 16 32143166 to 32143194 28 - TSS region transcription start site region 140781
Cpgi8184 16 32143247 to 32143568 321 CpG island CpG island 8184
Tssr140782 16 32144045 to 32144084 39 - TSS region transcription start site region 140782
Tssr140783 16 32144433 to 32144453 20 - TSS region transcription start site region 140783
Tssr140784 16 32144509 to 32144520 11 - TSS region transcription start site region 140784
Tssr140785 16 32145686 to 32145690 4 - TSS region transcription start site region 140785
Tssr140786 16 32163249 to 32163297 48 - TSS region transcription start site region 140786
Tssr140787 16 32163372 to 32163438 66 - TSS region transcription start site region 140787
Tssr140788 16 32163498 to 32163542 44 - TSS region transcription start site region 140788
Tssr140789 16 32164372 to 32164378 6 - TSS region transcription start site region 140789
Tssr140790 16 32164472 to 32164488 16 - TSS region transcription start site region 140790
Cpgi8185 16 32165234 to 32165569 335 CpG island CpG island 8185
Tssr140791 16 32165454 to 32165494 40 - TSS region transcription start site region 140791
Tssr140792 16 32165686 to 32165697 11 - TSS region transcription start site region 140792
Tssr140793 16 32174467 to 32174480 13 - TSS region transcription start site region 140793
Tssr140794 16 32176922 to 32176954 32 - TSS region transcription start site region 140794
Tssr137949 16 32177578 to 32177589 11 + TSS region transcription start site region 137949
Tssr137950 16 32177663 to 32177675 12 + TSS region transcription start site region 137950
Tssr140795 16 32179579 to 32179586 7 - TSS region transcription start site region 140795
Tssr140796 16 32179596 to 32179608 12 - TSS region transcription start site region 140796
Tssr140797 16 32179614 to 32179637 23 - TSS region transcription start site region 140797
Tssr140798 16 32179675 to 32179688 13 - TSS region transcription start site region 140798
Tssr137951 16 32179776 to 32179788 12 + TSS region transcription start site region 137951
Tssr137952 16 32179794 to 32179835 41 + TSS region transcription start site region 137952
Bex6 16 32179800 to 32186944 7144 + protein coding gene brain expressed family member 6
Tssr137953 16 32179838 to 32179850 12 + TSS region transcription start site region 137953
Tssr137954 16 32179854 to 32179857 3 + TSS region transcription start site region 137954
Tssr137955 16 32183932 to 32183934 2 + TSS region transcription start site region 137955
Fbxo45 16 32230112 to 32247025 16913 - protein coding gene F-box protein 45
5730596P11Rik 16 32241064 to 32242828 1764 unclassified gene RIKEN cDNA 5730596P11 gene
Gm25848 16 32243712 to 32243855 143 - snoRNA gene predicted gene, 25848
Tssr140799 16 32243852 to 32243855 3 - TSS region transcription start site region 140799
Cpgi8186 16 32246308 to 32247496 1188 CpG island CpG island 8186
Tssr140800 16 32246879 to 32246947 68 - TSS region transcription start site region 140800
Tssr140801 16 32247103 to 32247148 45 - TSS region transcription start site region 140801
Tssr140802 16 32247152 to 32247179 27 - TSS region transcription start site region 140802
Tssr137956 16 32247221 to 32247283 62 + TSS region transcription start site region 137956
Wdr53 16 32247227 to 32257083 9856 + protein coding gene WD repeat domain 53
Mir1946a 16 32267450 to 32267583 133 - miRNA gene microRNA 1946a
Tssr137957 16 32271473 to 32271523 50 + TSS region transcription start site region 137957
Tssr137958 16 32271530 to 32271544 14 + TSS region transcription start site region 137958
Tssr137959 16 32271545 to 32271559 14 + TSS region transcription start site region 137959
Smco1 16 32271609 to 32274779 3170 + protein coding gene single-pass membrane protein with coiled-coil domains 1
Cpgi8187 16 32277321 to 32278321 1000 CpG island CpG island 8187
Tssr137960 16 32277449 to 32277462 13 + TSS region transcription start site region 137960
Rnf168 16 32277459 to 32301434 23975 + protein coding gene ring finger protein 168
Tssr137961 16 32277479 to 32277524 45 + TSS region transcription start site region 137961
Tssr137962 16 32277528 to 32277566 38 + TSS region transcription start site region 137962
Tssr137963 16 32277648 to 32277651 3 + TSS region transcription start site region 137963
5830438M01Rik 16 32303126 to 32304493 1367 unclassified gene RIKEN cDNA 5830438M01 gene
Tssr137964 16 32303809 to 32303813 4 + TSS region transcription start site region 137964