Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:31943049-32063058

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pigz 16 31933851 to 31946046 12195 + protein coding gene phosphatidylinositol glycan anchor biosynthesis, class Z
Cpgi8177 16 31944091 to 31944306 215 CpG island CpG island 8177
0610012G03Rik 16 31947050 to 31948494 1444 - protein coding gene RIKEN cDNA 0610012G03 gene
Cpgi8178 16 31947792 to 31949036 1244 CpG island CpG island 8178
Tssr140759 16 31948413 to 31948430 17 - TSS region transcription start site region 140759
Tssr140760 16 31948432 to 31948542 110 - TSS region transcription start site region 140760
Ncbp2 16 31948546 to 31958472 9926 + protein coding gene nuclear cap binding protein subunit 2
Tssr137935 16 31948572 to 31948618 46 + TSS region transcription start site region 137935
Tssr137936 16 31948624 to 31948641 17 + TSS region transcription start site region 137936
Senp5 16 31959672 to 32003287 43615 - protein coding gene SUMO/sentrin specific peptidase 5
Cpgi8179 16 31970053 to 31970256 203 CpG island CpG island 8179
Gm15696 16 31970362 to 31970806 444 - pseudogene predicted gene 15696
Cpgi8180 16 31970624 to 31970858 234 CpG island CpG island 8180
Gm26269 16 31982109 to 31982234 125 + miRNA gene predicted gene, 26269
D16Mit103 16 31984103 to 31984214 111 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 103
Rapop6 16 31984103 to 31984214 111 QTL radiation-induced apoptosis 6
Gm49733 16 31986831 to 31987123 292 - sense intronic lncRNA gene predicted gene, 49733
Gm15694 16 31987178 to 31987460 282 - pseudogene predicted gene 15694
Hmgb1-ps6 16 31991253 to 31991866 613 - pseudogene high mobility group box 1, pseudogene 6
Tssr140761 16 31996675 to 31996697 22 - TSS region transcription start site region 140761
Cpgi8181 16 32002596 to 32003490 894 CpG island CpG island 8181
Tssr140762 16 32003049 to 32003058 9 - TSS region transcription start site region 140762
Tssr140763 16 32003122 to 32003183 61 - TSS region transcription start site region 140763
Tssr137937 16 32003220 to 32003266 46 + TSS region transcription start site region 137937
Tssr140764 16 32010110 to 32010138 28 - TSS region transcription start site region 140764
Pak2 16 32016290 to 32079342 63052 - protein coding gene p21 (RAC1) activated kinase 2
Tssr140765 16 32017823 to 32017827 4 - TSS region transcription start site region 140765
Tssr140766 16 32019490 to 32019501 11 - TSS region transcription start site region 140766
Tssr140767 16 32019587 to 32019600 13 - TSS region transcription start site region 140767
Tssr140768 16 32027074 to 32027107 33 - TSS region transcription start site region 140768
Tssr140769 16 32052323 to 32052350 27 - TSS region transcription start site region 140769