Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:31917074-32137107

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69 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm15703 16 31924989 to 31925868 879 + pseudogene predicted gene 15703
Tssr137930 16 31927024 to 31927043 19 + TSS region transcription start site region 137930
Cpgi8175 16 31932779 to 31934190 1411 CpG island CpG island 8175
Gm49731 16 31933647 to 31935380 1733 + unclassified gene predicted gene, 49731
Pigz 16 31933851 to 31946046 12195 + protein coding gene phosphatidylinositol glycan anchor biosynthesis, class Z
Tssr137931 16 31933923 to 31933964 41 + TSS region transcription start site region 137931
Tssr137932 16 31933968 to 31934006 38 + TSS region transcription start site region 137932
Cpgi8176 16 31935348 to 31935841 493 CpG island CpG island 8176
Tssr140758 16 31935365 to 31935390 25 - TSS region transcription start site region 140758
Tssr137933 16 31940825 to 31940849 24 + TSS region transcription start site region 137933
Tssr137934 16 31942492 to 31942496 4 + TSS region transcription start site region 137934
Cpgi8177 16 31944091 to 31944306 215 CpG island CpG island 8177
0610012G03Rik 16 31947050 to 31948494 1444 - protein coding gene RIKEN cDNA 0610012G03 gene
Cpgi8178 16 31947792 to 31949036 1244 CpG island CpG island 8178
Tssr140759 16 31948413 to 31948430 17 - TSS region transcription start site region 140759
Tssr140760 16 31948432 to 31948542 110 - TSS region transcription start site region 140760
Ncbp2 16 31948546 to 31958472 9926 + protein coding gene nuclear cap binding protein subunit 2
Tssr137935 16 31948572 to 31948618 46 + TSS region transcription start site region 137935
Tssr137936 16 31948624 to 31948641 17 + TSS region transcription start site region 137936
Senp5 16 31959672 to 32003287 43615 - protein coding gene SUMO/sentrin specific peptidase 5
Cpgi8179 16 31970053 to 31970256 203 CpG island CpG island 8179
Gm15696 16 31970362 to 31970806 444 - pseudogene predicted gene 15696
Cpgi8180 16 31970624 to 31970858 234 CpG island CpG island 8180
Gm26269 16 31982109 to 31982234 125 + miRNA gene predicted gene, 26269
Rapop6 16 31984103 to 31984214 111 QTL radiation-induced apoptosis 6
D16Mit103 16 31984103 to 31984214 111 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 103
Gm49733 16 31986831 to 31987123 292 - sense intronic lncRNA gene predicted gene, 49733
Gm15694 16 31987178 to 31987460 282 - pseudogene predicted gene 15694
Hmgb1-ps6 16 31991253 to 31991866 613 - pseudogene high mobility group box 1, pseudogene 6
Tssr140761 16 31996675 to 31996697 22 - TSS region transcription start site region 140761
Cpgi8181 16 32002596 to 32003490 894 CpG island CpG island 8181
Tssr140762 16 32003049 to 32003058 9 - TSS region transcription start site region 140762
Tssr140763 16 32003122 to 32003183 61 - TSS region transcription start site region 140763
Tssr137937 16 32003220 to 32003266 46 + TSS region transcription start site region 137937
Tssr140764 16 32010110 to 32010138 28 - TSS region transcription start site region 140764
Pak2 16 32016290 to 32079342 63052 - protein coding gene p21 (RAC1) activated kinase 2
Tssr140765 16 32017823 to 32017827 4 - TSS region transcription start site region 140765
Tssr140766 16 32019490 to 32019501 11 - TSS region transcription start site region 140766
Tssr140767 16 32019587 to 32019600 13 - TSS region transcription start site region 140767
Tssr140768 16 32027074 to 32027107 33 - TSS region transcription start site region 140768
Tssr140769 16 32052323 to 32052350 27 - TSS region transcription start site region 140769
Gm26419 16 32065910 to 32066042 132 + snoRNA gene predicted gene, 26419
Tssr140770 16 32073791 to 32073808 17 - TSS region transcription start site region 140770
Tssr140771 16 32078081 to 32078085 4 - TSS region transcription start site region 140771
Tssr137938 16 32078225 to 32078234 9 + TSS region transcription start site region 137938
Cpgi8182 16 32078749 to 32079673 924 CpG island CpG island 8182
Tssr140772 16 32079124 to 32079159 35 - TSS region transcription start site region 140772
Tssr140773 16 32079170 to 32079183 13 - TSS region transcription start site region 140773
Tssr140774 16 32079227 to 32079241 14 - TSS region transcription start site region 140774
Tssr140775 16 32079270 to 32079368 98 - TSS region transcription start site region 140775
Pigx 16 32084416 to 32099727 15311 - protein coding gene phosphatidylinositol glycan anchor biosynthesis, class X
Cpgi8183 16 32099031 to 32100122 1091 CpG island CpG island 8183
Tssr140776 16 32099620 to 32099635 15 - TSS region transcription start site region 140776
Tssr140777 16 32099669 to 32099696 27 - TSS region transcription start site region 140777
Tssr140778 16 32099697 to 32099752 55 - TSS region transcription start site region 140778
Tssr137939 16 32099781 to 32099857 76 + TSS region transcription start site region 137939
Cep19 16 32099802 to 32108054 8252 + protein coding gene centrosomal protein 19
Tssr137940 16 32099904 to 32099973 69 + TSS region transcription start site region 137940
Tssr137941 16 32100040 to 32100055 15 + TSS region transcription start site region 137941
Tssr137942 16 32102531 to 32102541 10 + TSS region transcription start site region 137942
Tssr137943 16 32102926 to 32102938 12 + TSS region transcription start site region 137943
Tssr137944 16 32105086 to 32105122 36 + TSS region transcription start site region 137944
Tssr137945 16 32108860 to 32108879 19 + TSS region transcription start site region 137945
Gm15729 16 32108865 to 32113743 4878 + lincRNA gene predicted gene 15729
Tssr4844 16 32109087 to 32109126 39 + TSS region transcription start site region 4844
Tssr137946 16 32114671 to 32114674 3 + TSS region transcription start site region 137946
Tssr4845 16 32118031 to 32118033 2 - TSS region transcription start site region 4845
Tssr140779 16 32130309 to 32130336 27 - TSS region transcription start site region 140779
Tssr140780 16 32136037 to 32136040 3 - TSS region transcription start site region 140780