Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:31315120-31595134

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D16Mit110 16 31324304 to 31324397 93 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 110
AV205837 16 31325241 to 31327154 1913 + lincRNA gene expressed sequence AV205837
Tssr137891 16 31325257 to 31325269 12 + TSS region transcription start site region 137891
Tssr137892 16 31325276 to 31325294 18 + TSS region transcription start site region 137892
Gm41443 16 31342313 to 31351259 8946 - lncRNA gene predicted gene, 41443
Gm49404 16 31344147 to 31344505 358 + pseudogene predicted gene, 49404
1700007E05Rik 16 31376506 to 31379133 2627 - pseudogene RIKEN cDNA 1700007E05 gene
Gm49736 16 31412467 to 31416491 4024 + lincRNA gene predicted gene, 49736
Tssr140755 16 31421368 to 31421378 10 - TSS region transcription start site region 140755
Tssr137893 16 31422268 to 31422278 10 + TSS region transcription start site region 137893
Tssr137894 16 31422288 to 31422308 20 + TSS region transcription start site region 137894
Bdh1 16 31422297 to 31458901 36604 + protein coding gene 3-hydroxybutyrate dehydrogenase, type 1
Tssr137895 16 31422315 to 31422347 32 + TSS region transcription start site region 137895
Gm15743 16 31427876 to 31429776 1900 - antisense lncRNA gene predicted gene 15743
Cpgi8171 16 31428474 to 31430296 1822 CpG island CpG island 8171
Tssr137896 16 31428745 to 31428755 10 + TSS region transcription start site region 137896
Tssr137897 16 31428757 to 31428762 5 + TSS region transcription start site region 137897
Tssr137898 16 31428764 to 31428837 73 + TSS region transcription start site region 137898
Tssr137899 16 31428870 to 31428881 11 + TSS region transcription start site region 137899
Tssr137900 16 31428893 to 31428902 9 + TSS region transcription start site region 137900
Tssr140756 16 31429646 to 31429691 45 - TSS region transcription start site region 140756
Tssr140757 16 31429719 to 31429741 22 - TSS region transcription start site region 140757
Tssr137901 16 31450197 to 31450210 13 + TSS region transcription start site region 137901
Tssr137902 16 31450229 to 31450238 9 + TSS region transcription start site region 137902
Tssr137903 16 31455105 to 31455117 12 + TSS region transcription start site region 137903
Tssr137904 16 31455120 to 31455134 14 + TSS region transcription start site region 137904
Tssr137905 16 31455140 to 31455160 20 + TSS region transcription start site region 137905
Tssr137906 16 31456655 to 31456680 25 + TSS region transcription start site region 137906
Gm49695 16 31469926 to 31476353 6427 + lincRNA gene predicted gene, 49695
Gm34032 16 31476082 to 31578483 102401 - lncRNA gene predicted gene, 34032
Gm46560 16 31508387 to 31511777 3390 + lincRNA gene predicted gene, 46560
Gm34256 16 31590196 to 31593220 3024 - lincRNA gene predicted gene, 34256