Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:31293387-31726777

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66 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Apod 16 31296192 to 31314808 18616 - protein coding gene apolipoprotein D
Tssr137889 16 31297333 to 31297344 11 + TSS region transcription start site region 137889
Tssr137890 16 31297385 to 31297392 7 + TSS region transcription start site region 137890
Tssr140741 16 31297453 to 31297465 12 - TSS region transcription start site region 140741
Tssr4839 16 31297497 to 31297506 9 + TSS region transcription start site region 4839
Tssr140742 16 31297503 to 31297525 22 - TSS region transcription start site region 140742
Tssr4840 16 31297552 to 31297584 32 - TSS region transcription start site region 4840
Tssr140743 16 31300441 to 31300459 18 - TSS region transcription start site region 140743
Tssr140744 16 31300479 to 31300502 23 - TSS region transcription start site region 140744
Tssr4841 16 31300508 to 31300511 3 - TSS region transcription start site region 4841
Tssr140745 16 31301250 to 31301262 12 - TSS region transcription start site region 140745
Tssr140746 16 31303464 to 31303491 27 - TSS region transcription start site region 140746
Tssr140747 16 31303509 to 31303540 31 - TSS region transcription start site region 140747
Tssr140748 16 31311052 to 31311064 12 - TSS region transcription start site region 140748
Tssr140749 16 31311071 to 31311081 10 - TSS region transcription start site region 140749
Tssr140750 16 31311093 to 31311109 16 - TSS region transcription start site region 140750
Tssr140751 16 31311147 to 31311165 18 - TSS region transcription start site region 140751
Tssr140752 16 31311328 to 31311341 13 - TSS region transcription start site region 140752
Tssr140753 16 31314537 to 31314548 11 - TSS region transcription start site region 140753
Tssr140754 16 31314586 to 31314605 19 - TSS region transcription start site region 140754
D16Mit110 16 31324304 to 31324397 93 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 110
AV205837 16 31325241 to 31327154 1913 + lincRNA gene expressed sequence AV205837
Tssr137891 16 31325257 to 31325269 12 + TSS region transcription start site region 137891
Tssr137892 16 31325276 to 31325294 18 + TSS region transcription start site region 137892
Gm41443 16 31342313 to 31351259 8946 - lncRNA gene predicted gene, 41443
Gm49404 16 31344147 to 31344505 358 + pseudogene predicted gene, 49404
1700007E05Rik 16 31376506 to 31379133 2627 - pseudogene RIKEN cDNA 1700007E05 gene
Gm49736 16 31412467 to 31416491 4024 + lincRNA gene predicted gene, 49736
Tssr140755 16 31421368 to 31421378 10 - TSS region transcription start site region 140755
Tssr137893 16 31422268 to 31422278 10 + TSS region transcription start site region 137893
Tssr137894 16 31422288 to 31422308 20 + TSS region transcription start site region 137894
Bdh1 16 31422297 to 31458901 36604 + protein coding gene 3-hydroxybutyrate dehydrogenase, type 1
Tssr137895 16 31422315 to 31422347 32 + TSS region transcription start site region 137895
Gm15743 16 31427876 to 31429776 1900 - antisense lncRNA gene predicted gene 15743
Cpgi8171 16 31428474 to 31430296 1822 CpG island CpG island 8171
Tssr137896 16 31428745 to 31428755 10 + TSS region transcription start site region 137896
Tssr137897 16 31428757 to 31428762 5 + TSS region transcription start site region 137897
Tssr137898 16 31428764 to 31428837 73 + TSS region transcription start site region 137898
Tssr137899 16 31428870 to 31428881 11 + TSS region transcription start site region 137899
Tssr137900 16 31428893 to 31428902 9 + TSS region transcription start site region 137900
Tssr140756 16 31429646 to 31429691 45 - TSS region transcription start site region 140756
Tssr140757 16 31429719 to 31429741 22 - TSS region transcription start site region 140757
Tssr137901 16 31450197 to 31450210 13 + TSS region transcription start site region 137901
Tssr137902 16 31450229 to 31450238 9 + TSS region transcription start site region 137902
Tssr137903 16 31455105 to 31455117 12 + TSS region transcription start site region 137903
Tssr137904 16 31455120 to 31455134 14 + TSS region transcription start site region 137904
Tssr137905 16 31455140 to 31455160 20 + TSS region transcription start site region 137905
Tssr137906 16 31456655 to 31456680 25 + TSS region transcription start site region 137906
Gm49695 16 31469926 to 31476353 6427 + lincRNA gene predicted gene, 49695
Gm34032 16 31476082 to 31578483 102401 - lncRNA gene predicted gene, 34032
Gm46560 16 31508387 to 31511777 3390 + lincRNA gene predicted gene, 46560
Gm34256 16 31590196 to 31593220 3024 - lincRNA gene predicted gene, 34256
Gm536 16 31617868 to 31638979 21111 + lincRNA gene predicted gene 536
Cpgi8172 16 31663294 to 31664689 1395 CpG island CpG island 8172
Dlg1 16 31663443 to 31873356 209913 + protein coding gene discs large MAGUK scaffold protein 1
Tssr137907 16 31663841 to 31663912 71 + TSS region transcription start site region 137907
Tssr137908 16 31663937 to 31663980 43 + TSS region transcription start site region 137908
Tssr137909 16 31664110 to 31664118 8 + TSS region transcription start site region 137909
Tssr137910 16 31664130 to 31664178 48 + TSS region transcription start site region 137910
Tssr137911 16 31664185 to 31664188 3 + TSS region transcription start site region 137911
Gm49712 16 31679241 to 31680609 1368 + unclassified gene predicted gene, 49712
Tssr137912 16 31695504 to 31695524 20 + TSS region transcription start site region 137912
Tssr137913 16 31695539 to 31695555 16 + TSS region transcription start site region 137913
Tssr137914 16 31695883 to 31695922 39 + TSS region transcription start site region 137914
Tssr137915 16 31713445 to 31713462 17 + TSS region transcription start site region 137915
Tssr137916 16 31716096 to 31716099 3 + TSS region transcription start site region 137916