Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:31178590-31303313

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Acap2 16 31092412 to 31201245 108833 - protein coding gene ArfGAP with coiled-coil, ankyrin repeat and PH domains 2
Tssr140734 16 31179040 to 31179044 4 - TSS region transcription start site region 140734
Tssr140735 16 31191950 to 31191987 37 - TSS region transcription start site region 140735
Cpgi8169 16 31199741 to 31201493 1752 CpG island CpG island 8169
Tssr140736 16 31201150 to 31201243 93 - TSS region transcription start site region 140736
D16Mit166 16 31216607 to 31216754 147 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 166
Gm41442 16 31233590 to 31248313 14723 + lincRNA gene predicted gene, 41442
Tssr137886 16 31234355 to 31234367 12 + TSS region transcription start site region 137886
Tssr4838 16 31234387 to 31234403 16 + TSS region transcription start site region 4838
Tssr137887 16 31235584 to 31235593 9 + TSS region transcription start site region 137887
2310004O12Rik 16 31249248 to 31249745 497 unclassified gene RIKEN cDNA 2310004O12 gene
Ppp1r2 16 31251541 to 31275277 23736 - protein coding gene protein phosphatase 1, regulatory inhibitor subunit 2
Gm27415 16 31261505 to 31261599 94 + miRNA gene predicted gene, 27415
D16Mit229 16 31263023 to 31263144 121 DNA segment DNA Segment, Chr 16, Massachusetts Institute of Technology-229
Cpgi8170 16 31274686 to 31275561 875 CpG island CpG island 8170
Tssr140737 16 31275218 to 31275234 16 - TSS region transcription start site region 140737
Tssr140738 16 31275250 to 31275267 17 - TSS region transcription start site region 140738
Tssr140739 16 31275281 to 31275290 9 - TSS region transcription start site region 140739
Tssr137888 16 31275394 to 31275425 31 + TSS region transcription start site region 137888
Tssr140740 16 31275414 to 31275425 11 - TSS region transcription start site region 140740
Gm49767 16 31284424 to 31291896 7472 - lincRNA gene predicted gene, 49767
Gm49546 16 31292530 to 31292809 279 - pseudogene predicted gene, 49546
Apod 16 31296192 to 31314808 18616 - protein coding gene apolipoprotein D
Tssr137889 16 31297333 to 31297344 11 + TSS region transcription start site region 137889
Tssr137890 16 31297385 to 31297392 7 + TSS region transcription start site region 137890
Tssr140741 16 31297453 to 31297465 12 - TSS region transcription start site region 140741
Tssr4839 16 31297497 to 31297506 9 + TSS region transcription start site region 4839
Tssr140742 16 31297503 to 31297525 22 - TSS region transcription start site region 140742
Tssr4840 16 31297552 to 31297584 32 - TSS region transcription start site region 4840
Tssr140743 16 31300441 to 31300459 18 - TSS region transcription start site region 140743
Tssr140744 16 31300479 to 31300502 23 - TSS region transcription start site region 140744
Tssr4841 16 31300508 to 31300511 3 - TSS region transcription start site region 4841
Tssr140745 16 31301250 to 31301262 12 - TSS region transcription start site region 140745