Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:31079040-31279044

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Xxylt1 16 30955347 to 31081432 126085 - protein coding gene xyloside xylosyltransferase 1
Gm46554 16 31075603 to 31080774 5171 - lncRNA gene predicted gene, 46554
Cpgi8168 16 31080537 to 31081681 1144 CpG island CpG island 8168
Tssr140725 16 31081354 to 31081359 5 - TSS region transcription start site region 140725
Tssr140726 16 31081363 to 31081439 76 - TSS region transcription start site region 140726
Acap2 16 31092412 to 31201245 108833 - protein coding gene ArfGAP with coiled-coil, ankyrin repeat and PH domains 2
Tssr140727 16 31140538 to 31140541 3 - TSS region transcription start site region 140727
Tssr137885 16 31141510 to 31141514 4 + TSS region transcription start site region 137885
Tssr140728 16 31142078 to 31142104 26 - TSS region transcription start site region 140728
Tssr140729 16 31142115 to 31142129 14 - TSS region transcription start site region 140729
Tssr140730 16 31143805 to 31143808 3 - TSS region transcription start site region 140730
Tssr140731 16 31151919 to 31151923 4 - TSS region transcription start site region 140731
Gm18237 16 31157870 to 31158773 903 + pseudogene predicted gene, 18237
Tssr140732 16 31167991 to 31167995 4 - TSS region transcription start site region 140732
Tssr140733 16 31171566 to 31171569 3 - TSS region transcription start site region 140733
2810455B08Rik 16 31173656 to 31174884 1228 unclassified gene RIKEN cDNA 2810455B08 gene
Tssr140734 16 31179040 to 31179044 4 - TSS region transcription start site region 140734
Tssr140735 16 31191950 to 31191987 37 - TSS region transcription start site region 140735
Cpgi8169 16 31199741 to 31201493 1752 CpG island CpG island 8169
Tssr140736 16 31201150 to 31201243 93 - TSS region transcription start site region 140736
D16Mit166 16 31216607 to 31216754 147 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 166
Gm41442 16 31233590 to 31248313 14723 + lincRNA gene predicted gene, 41442
Tssr137886 16 31234355 to 31234367 12 + TSS region transcription start site region 137886
Tssr4838 16 31234387 to 31234403 16 + TSS region transcription start site region 4838
Tssr137887 16 31235584 to 31235593 9 + TSS region transcription start site region 137887
2310004O12Rik 16 31249248 to 31249745 497 unclassified gene RIKEN cDNA 2310004O12 gene
Ppp1r2 16 31251541 to 31275277 23736 - protein coding gene protein phosphatase 1, regulatory inhibitor subunit 2
Gm27415 16 31261505 to 31261599 94 + miRNA gene predicted gene, 27415
D16Mit229 16 31263023 to 31263144 121 DNA segment DNA Segment, Chr 16, Massachusetts Institute of Technology-229
Cpgi8170 16 31274686 to 31275561 875 CpG island CpG island 8170
Tssr140737 16 31275218 to 31275234 16 - TSS region transcription start site region 140737
Tssr140738 16 31275250 to 31275267 17 - TSS region transcription start site region 140738
Tssr140739 16 31275281 to 31275290 9 - TSS region transcription start site region 140739
Tssr137888 16 31275394 to 31275425 31 + TSS region transcription start site region 137888
Tssr140740 16 31275414 to 31275425 11 - TSS region transcription start site region 140740