Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:30331369-30817613

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Atp13a3 16 30312423 to 30388860 76437 - protein coding gene ATPase type 13A3
Tssr140713 16 30359246 to 30359250 4 - TSS region transcription start site region 140713
Cpgi8159 16 30387806 to 30389527 1721 CpG island CpG island 8159
Tssr140714 16 30388690 to 30388701 11 - TSS region transcription start site region 140714
Tssr140715 16 30388768 to 30388802 34 - TSS region transcription start site region 140715
Tssr140716 16 30388806 to 30388858 52 - TSS region transcription start site region 140716
Tssr140717 16 30389312 to 30389348 36 - TSS region transcription start site region 140717
Tssr4836 16 30436128 to 30436129 1 - TSS region transcription start site region 4836
Gm49679 16 30452588 to 30452898 310 + pseudogene predicted gene, 49679
Cpgi8160 16 30510519 to 30511108 589 CpG island CpG island 8160
Tssr137878 16 30510669 to 30510694 25 + TSS region transcription start site region 137878
Tssr4837 16 30510697 to 30510725 28 + TSS region transcription start site region 4837
Tmem44 16 30511855 to 30550834 38979 - protein coding gene transmembrane protein 44
2810481J17Rik 16 30521828 to 30522612 784 unclassified gene RIKEN cDNA 2810481J17 gene
Cpgi8161 16 30532142 to 30532324 182 CpG island CpG island 8161
Tssr137879 16 30536066 to 30536084 18 + TSS region transcription start site region 137879
Cpgi8162 16 30549932 to 30551003 1071 CpG island CpG island 8162
Tssr140718 16 30550529 to 30550549 20 - TSS region transcription start site region 140718
Tssr140719 16 30550560 to 30550594 34 - TSS region transcription start site region 140719
Lsg1 16 30561369 to 30587613 26244 - protein coding gene large 60S subunit nuclear export GTPase 1
Cpgi8163 16 30587315 to 30587796 481 CpG island CpG island 8163
Tssr140720 16 30587537 to 30587597 60 - TSS region transcription start site region 140720
Cpgi8164 16 30597142 to 30597329 187 CpG island CpG island 8164
Cpgi8165 16 30599478 to 30601863 2385 CpG island CpG island 8165
Tssr137880 16 30599717 to 30599734 17 + TSS region transcription start site region 137880
Fam43a 16 30599723 to 30602797 3074 + protein coding gene family with sequence similarity 43, member A
Tssr137881 16 30601750 to 30601763 13 + TSS region transcription start site region 137881
Cpgi8166 16 30656952 to 30657366 414 CpG island CpG island 8166
Tssr137882 16 30692258 to 30692308 50 + TSS region transcription start site region 137882
Tssr140721 16 30693946 to 30693961 15 - TSS region transcription start site region 140721
Gm49754 16 30789945 to 30793255 3310 - lincRNA gene predicted gene, 49754
Gm33502 16 30793422 to 30798813 5391 + lncRNA gene predicted gene, 33502
Gm41439 16 30804134 to 30805812 1678 - lncRNA gene predicted gene, 41439
D16Mit36 16 30805556 to 30805705 149 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 36
Gm26295 16 30814162 to 30814268 106 + snRNA gene predicted gene, 26295